The maternal and early embryonic transcriptome of the milkweed bug Oncopeltus fasciatus

Gene Expression in Proliferating Cells of the Dinoflagellate Alexandrium catenella (Dinophyceae)

(2010) E. Toulza et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Transcriptome sequencing and comparative transcriptome analysis of the scleroglucan producer Sclerotium rolfsii

(2010) Jochen Schmid et al.   BMC GENOMICS

Population-level transcriptome sequencing of nonmodel organisms Erynnis propertius and Papilio zelicaon

(2010) Shawn T O'Neil et al.   BMC GENOMICS

Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery

(2010) Thomas L Parchman et al.   BMC GENOMICS

Massively parallel pyrosequencing-based transcriptome analyses of small brown planthopper (Laodelphax striatellus), a vector insect transmitting rice stripe virus (RSV)

(2010) Fujie Zhang et al.   BMC GENOMICS

Comparing de novo assemblers for 454 transcriptome data

(2010) Sujai Kumar et al.   BMC GENOMICS

Transcriptome sequencing and development of an expression microarray platform for the domestic ferret

(2010) Carl E Bruder et al.   BMC GENOMICS

Uncovering the evolutionary origin of plant molecular processes: comparison of Coleochaete (Coleochaetales) and Spirogyra (Zygnematales) transcriptomes

(2010) Ruth E Timme et al.   BMC PLANT BIOLOGY

The role of the pupal determinant broad during embryonic development of a direct-developing insect

(2010) Deniz F. Erezyilmaz et al.   DEVELOPMENT GENES AND EVOLUTION

Optimization of de novo transcriptome assembly from next-generation sequencing data

(2010) Y. Surget-Groba et al.   GENOME RESEARCH

Key roles of the Broad-Complex gene in insect embryogenesis

(2010) Maria-Dolors Piulachs et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Genome Sequence of the Pea Aphid Acyrthosiphon pisum

(2010)   PLOS BIOLOGY

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

Next generation transcriptomes for next generation genomes using est2assembly

(2009) Alexie Papanicolaou et al.   BMC BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Combining next-generation pyrosequencing with microarray for large scale expression analysis in non-model species

(2009) Diana Bellin et al.   BMC GENOMICS

Gene discovery using massively parallel pyrosequencing to develop ESTs for the flesh fly Sarcophaga crassipalpis

(2009) Daniel A Hahn et al.   BMC GENOMICS

Characterization of the Zoarces viviparus liver transcriptome using massively parallel pyrosequencing

(2009) Erik Kristiansson et al.   BMC GENOMICS

Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx

(2009) Eli Meyer et al.   BMC GENOMICS

Late extraembryonic morphogenesis and its zenRNAi-induced failure in the milkweed bug Oncopeltus fasciatus

(2009) Kristen A. Panfilio   DEVELOPMENTAL BIOLOGY

The nuclear receptor E75A has a novel pair-rule-like function in patterning the milkweed bug, Oncopeltus fasciatus

(2009) Deniz F. Erezyilmaz et al.   DEVELOPMENTAL BIOLOGY

Pyrosequencing of the midgut transcriptome of the poplar leaf beetle Chrysomela tremulae reveals new gene families in Coleoptera

(2009) Yannick Pauchet et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

A 454 sequencing approach for large scale phylogenomic analysis of the common emperor scorpion (Pandinus imperator)

(2009) Falko Roeding et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The molecular machinery of germ line specification

(2009) Ben Ewen-Campen et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

The Universal Protein Resource (UniProt) in 2010

(2009)   NUCLEIC ACIDS RESEARCH

BIOSCIENCE: Emerging Market Organisms

(2009) J. M. W. Slack   SCIENCE

Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches

(2008) Foo Cheung et al.   BMC GENOMICS

High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome

(2008) Evandro Novaes et al.   BMC GENOMICS

Self-Regulatory Circuits in Dorsoventral Axis Formation of the Short-Germ Beetle Tribolium castaneum

(2008) Rodrigo Nunes da Fonseca et al.   DEVELOPMENTAL CELL

Quality scores and SNP detection in sequencing-by-synthesis systems

(2008) W. Brockman et al.   GENOME RESEARCH

Construction of a robust microarray from a non-model species largemouth bass, Micropterus salmoides (Lacèpede), using pyrosequencing technology

(2008) N. Garcia-Reyero et al.   JOURNAL OF FISH BIOLOGY

Normalization of full-length enriched cDNA

(2008) Ekaterina A. Bogdanova et al.   Molecular BioSystems

Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing

(2008) J. CRISTOBAL VERA et al.   MOLECULAR ECOLOGY

Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals

(2008) Andrew Grimson et al.   NATURE

VectorBase: a data resource for invertebrate vector genomics

(2008) D. Lawson et al.   NUCLEIC ACIDS RESEARCH

FlyBase: enhancing Drosophila Gene Ontology annotations

(2008) S. Tweedie et al.   NUCLEIC ACIDS RESEARCH

Origins and evolution of eukaryotic RNA interference

(2008) S SHABALINA et al.   TRENDS IN ECOLOGY & EVOLUTION

Are we there yet? Tracking the development of new model systems

(2008) Arhat Abzhanov et al.   TRENDS IN GENETICS