Comparative Transcriptome Analyses between a Spontaneous Late-Ripening Sweet Orange Mutant and Its Wild Type Suggest the Functions of ABA, Sucrose and JA during Citrus Fruit Ripening

Genome-wide comparison of microRNAs and their targeted transcripts among leaf, flower and fruit of sweet orange

(2014) Yuanlong Liu et al.   BMC GENOMICS

A comparative study of ripening among berries of the grape cluster reveals an altered transcriptional programme and enhanced ripening rate in delayed berries

(2014) Satyanarayana Gouthu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Insights into transcriptional regulation of  -D-N-acetylhexosaminidase, an N-glycan-processing enzyme involved in ripening-associated fruit softening

(2014) M. Irfan et al.   JOURNAL OF EXPERIMENTAL BOTANY

An integrative analysis of the transcriptome and proteome of the pulp of a spontaneous late-ripening sweet orange mutant and its wild type improves our understanding of fruit ripening in citrus

(2014) Juxun Wu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Members of the tomato FRUITFULL MADS-box family regulate style abscission and fruit ripening

(2014) Shufen Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Expression of a functional jasmonic acid carboxyl methyltransferase is negatively correlated with strawberry fruit development

(2014) Anja Preuß et al.   JOURNAL OF PLANT PHYSIOLOGY

Comparative Transcriptome Analysis of Climacteric Fruit of Chinese Pear (Pyrus ussuriensis) Reveals New Insights into Fruit Ripening

(2014) Guohui Huang et al.   PLoS One

A novel carotenoid cleavage activity involved in the biosynthesis of Citrus fruit-specific apocarotenoid pigments

(2013) María J. Rodrigo et al.   JOURNAL OF EXPERIMENTAL BOTANY

Tissue-Specific and Developmental Expression Pattern of Abscisic Acid Biosynthetic Genes in Peach Fruit: Possible Role of the Hormone in the Coordinated Growth of Seed and Mesocarp

(2013) Rachele Falchi et al.   JOURNAL OF PLANT GROWTH REGULATION

Early Methyl Jasmonate Application to Peach Delays Fruit/Seed Development by Altering the Expression of Multiple Hormone-Related Genes

(2013) Karina Beatriz Ruiz et al.   JOURNAL OF PLANT GROWTH REGULATION

Sucrose functions as a signal involved in the regulation of strawberry fruit development and ripening

(2013) Haifeng Jia et al.   NEW PHYTOLOGIST

Changes in the abscisic acid levels and related gene expression during fruit development and ripening in bilberry (Vaccinium myrtillus L.)

(2013) Katja Karppinen et al.   PHYTOCHEMISTRY

Methyl jasmonate treatment induces changes in fruit ripening by modifying the expression of several ripening genes in Fragaria chiloensis fruit

(2013) Cristóbal M. Concha et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Biochemical bases and molecular regulation of pigmentation in the peel of Citrus fruit

(2013) María J. Rodrigo et al.   SCIENTIA HORTICULTURAE

Transcriptome changes during fruit development and ripening of sweet orange (Citrus sinensis)

(2012) Keqin Yu et al.   BMC GENOMICS

Transcriptomic analysis of Chinese bayberry (Myrica rubra) fruit development and ripening using RNA-Seq

(2012) Chao Feng et al.   BMC GENOMICS

Combining laser microdissection and RNA-seq to chart the transcriptional landscape of fungal development

(2012) Ines Teichert et al.   BMC GENOMICS

Ethylene independent induction of lycopene biosynthesis in tomato fruits by jasmonates

(2012) L. Liu et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Citrus ABA signalosome: identification and transcriptional regulation during sweet orange fruit ripening and leaf dehydration

(2012) Paco Romero et al.   JOURNAL OF EXPERIMENTAL BOTANY

Ethylene and auxin biosynthesis and signaling are impaired by methyl jasmonate leading to a transient slowing down of ripening in peach fruit

(2012) Alvaro Soto et al.   JOURNAL OF PLANT PHYSIOLOGY

The draft genome of sweet orange (Citrus sinensis)

(2012) Qiang Xu et al.   NATURE GENETICS

High-throughput sequencing-based gene profiling on multi-staged fruit development of date palm (Phoenix dactylifera, L.)

(2012) Yuxin Yin et al.   PLANT MOLECULAR BIOLOGY

Citrus genomics

(2012) Fred G. Gmitter et al.   Tree Genetics & Genomes

Characterization of transcriptome dynamics during watermelon fruit development: sequencing, assembly, annotation and gene expression profiles

(2011) Shaogui Guo et al.   BMC GENOMICS

Identification of a GCC transcription factor responding to fruit colour change events in citrus through the transcriptomic analyses of two mutants

(2011) Gabino Ríos et al.   BMC PLANT BIOLOGY

Transcript and metabolite analysis in Trincadeira cultivar reveals novel information regarding the dynamics of grape ripening

(2011) Ana M Fortes et al.   BMC PLANT BIOLOGY

Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis

(2011) A. Pauli et al.   GENOME RESEARCH

Transcriptional regulation of SlPYL, SlPP2C, and SlSnRK2 gene families encoding ABA signal core components during tomato fruit development and drought stress

(2011) Liang Sun et al.   JOURNAL OF EXPERIMENTAL BOTANY

Hormonal and Nutritional Changes in the Flavedo Regulating Rind Color Development in Sweet Orange [Citrus sinensis (L.) Osb.]

(2011) Giuliana Gambetta et al.   JOURNAL OF PLANT GROWTH REGULATION

Abscisic Acid Plays an Important Role in the Regulation of Strawberry Fruit Ripening

(2011) Hai-Feng Jia et al.   PLANT PHYSIOLOGY

Transcriptome analysis of fruit development of a citrus late-ripening mutant by microarray

(2011) Jiwu Zeng et al.   SCIENTIA HORTICULTURAE

Comprehensive Analysis of Expressed Sequence Tags from the Pulp of the Red Mutant ‘Cara Cara’ Navel Orange (Citrus sinensis Osbeck)

(2010) Jun-Li Ye et al.   Journal of Integrative Plant Biology

Cloning and expression analysis of cDNAs for ABA 8′-hydroxylase during sweet cherry fruit maturation and under stress conditions

(2010) Jie Ren et al.   JOURNAL OF PLANT PHYSIOLOGY

Self-sterility in the mutant ‘Zigui shatian’ pummelo (Citrus grandis Osbeck) is due to abnormal post-zygotic embryo development and not self-incompatibility

(2010) Lijun Chai et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Characterization of Transcriptional Complexity during Berry Development in Vitis vinifera Using RNA-Seq

(2010) S. Zenoni et al.   PLANT PHYSIOLOGY

Sugar and abscisic acid signaling orthologs are activated at the onset of ripening in grape

(2010) Gregory A. Gambetta et al.   PLANTA

De novo assembly of human genomes with massively parallel short read sequencing

(2009) R. Li et al.   GENOME RESEARCH

Physiological and Molecular Analysis of the Maturation Process in Fruits of Clementine Mandarin and One of Its Late-Ripening Mutants

(2009) Gaetano Distefano et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Identification of flowering-related genes between early flowering trifoliate orange mutant and wild-type trifoliate orange (Poncirus trifoliata L. Raf.) by suppression subtraction hybridization (SSH) and macroarray

(2008) Jin-Zhi Zhang et al.   GENE

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

(2008) J. C. Marioni et al.   GENOME RESEARCH

Strawberry proteome characterization and its regulation during fruit ripening and in different genotypes

(2008) Linda Bianco et al.   Journal of Proteomics

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS