De Novo Assembly, Gene Annotation, and Marker Discovery in Stored-Product Pest Liposcelis entomophila (Enderlein) Using Transcriptome Sequences
Published 2013 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
De Novo Assembly, Gene Annotation, and Marker Discovery in Stored-Product Pest Liposcelis entomophila (Enderlein) Using Transcriptome Sequences
Authors
Keywords
Sequence databases, Transcriptome analysis, Insecticides, Insects, Sequence assembly tools, Protein sequencing, Drug metabolism, Sequence alignment
Journal
PLoS One
Volume 8, Issue 11, Pages e80046
Publisher
Public Library of Science (PLoS)
Online
2013-11-15
DOI
10.1371/journal.pone.0080046
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Neuroactive Insecticides: Targets, Selectivity, Resistance, and Secondary Effects
- (2013) John E. Casida et al. Annual Review of Entomology
- Five small heat shock protein genes from Chilo suppressalis: characteristics of gene, genomic organization, structural analysis, and transcription profiles
- (2013) Ming-Xing Lu et al. CELL STRESS & CHAPERONES
- Sequencing, de novo assembly, annotation and SSR and SNP detection of sabaigrass (Eulaliopsis binata) transcriptome
- (2013) Dian Zou et al. GENOMICS
- Identification of a critical region in the Drosophila ryanodine receptor that confers sensitivity to diamide insecticides
- (2013) Yong Tao et al. INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY
- Weight Loss and Germination Failure Caused by Psocids in Different Wheat Varieties
- (2013) S. G. Gautam et al. JOURNAL OF ECONOMIC ENTOMOLOGY
- Overexpression of small heat shock protein 21 protects the Chinese oak silkworm Antheraea pernyi against thermal stress
- (2013) Qiu-Ning Liu et al. JOURNAL OF INSECT PHYSIOLOGY
- Susceptibility of Stored-Product Psocids to Aerosol Insecticides
- (2013) George P. Opit et al. JOURNAL OF INSECT SCIENCE
- Microsatellites for Next-Generation Ecologists: A Post-Sequencing Bioinformatics Pipeline
- (2013) Iria Fernandez-Silva et al. PLoS One
- Four Heat Shock Protein Genes of the Endoparasitoid Wasp, Cotesia vestalis, and Their Transcriptional Profiles in Relation to Developmental Stages and Temperature
- (2013) Min Shi et al. PLoS One
- Sequencing and De Novo Assembly of the Western Tarnished Plant Bug (Lygus hesperus) Transcriptome
- (2013) J. Joe Hull et al. PLoS One
- Analysis of the Transcriptome of Blowfly Chrysomya megacephala (Fabricius) Larvae in Responses to Different Edible Oils
- (2013) Min Zhang et al. PLoS One
- Analysis of the Olive Fruit Fly Bactrocera oleae Transcriptome and Phylogenetic Classification of the Major Detoxification Gene Families
- (2013) Nena Pavlidi et al. PLoS One
- Transcriptomic and Proteomic Responses of Sweetpotato Whitefly, Bemisia tabaci, to Thiamethoxam
- (2013) Nina Yang et al. PLoS One
- Insect Ryanodine Receptor: Distinct but Coupled Insecticide Binding Sites for [N-C3H3]Chlorantraniliprole, Flubendiamide, and [3H]Ryanodine
- (2012) André K. Isaacs et al. CHEMICAL RESEARCH IN TOXICOLOGY
- Developmental and insecticide-resistant insights from the de novo assembled transcriptome of the diamondback moth, Plutella xylostella
- (2012) Weiyi He et al. GENOMICS
- De novo intestine-specific transcriptome of the brown planthopper Nilaparvata lugens revealed potential functions in digestion, detoxification and immune response
- (2012) Yan-Yuan Bao et al. GENOMICS
- Resistance to diamide insecticides in diamondback moth, Plutella xylostella (Lepidoptera: Plutellidae) is associated with a mutation in the membrane-spanning domain of the ryanodine receptor
- (2012) Bartek Troczka et al. INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY
- Hsp70 and small Hsps are the major heat shock protein members involved in midgut metamorphosis in the common cutworm, Spodoptera litura
- (2012) J. Gu et al. INSECT MOLECULAR BIOLOGY
- Transcription and Induction Profiles of Three Novel P450 Genes in Liposcelis bostrychophila (Psocoptera: Liposcelididae)
- (2012) Hong-Bo Jiang et al. JOURNAL OF ECONOMIC ENTOMOLOGY
- Fipronil resistance in Sogatella furcifera: Molecular cloning and functional expression of wild-type and mutant RDL GABA receptor subunits
- (2012) Toshifumi Nakao et al. JOURNAL OF PESTICIDE SCIENCE
- Cloning, characterisation and expression profiling of the cDNA encoding the ryanodine receptor in diamondback moth,Plutella xylostella(L.) (Lepidoptera: Plutellidae)
- (2012) Lei Guo et al. PEST MANAGEMENT SCIENCE
- Population Genetics of Two Asexually and Sexually Reproducing Psocids Species Inferred by the Analysis of Mitochondrial and Nuclear DNA Sequences
- (2012) Dan-Dan Wei et al. PLoS One
- The Multipartite Mitochondrial Genome of Liposcelis bostrychophila: Insights into the Evolution of Mitochondrial Genomes in Bilateral Animals
- (2012) Dan-Dan Wei et al. PLoS One
- Global Transcriptome Profiling of the Pine Shoot Beetle, Tomicus yunnanensis (Coleoptera: Scolytinae)
- (2012) Jia-Ying Zhu et al. PLoS One
- Molecular Characterization of a Ryanodine Receptor Gene in the Rice Leaffolder, Cnaphalocrocis medinalis (Guenée)
- (2012) Jianjun Wang et al. PLoS One
- The Transcriptome Profile of the Mosquito Culex quinquefasciatus following Permethrin Selection
- (2012) William R. Reid et al. PLoS One
- Pyrosequencing the transcriptome of the greenhouse whitefly, Trialeurodes vaporariorum reveals multiple transcripts encoding insecticide targets and detoxifying enzymes
- (2011) Nikos Karatolos et al. BMC GENOMICS
- Sequence Analysis of the Ribosomal Internal Transcribed Spacers Region in Psocids (Psocoptera: Liposcelididae) for Phylogenetic Inference and Species Discrimination
- (2011) Dan-Dan Wei et al. JOURNAL OF ECONOMIC ENTOMOLOGY
- Insect cytochromes P450: Topology of structural elements predicted to govern catalytic versatility
- (2011) Peter Hlavica JOURNAL OF INORGANIC BIOCHEMISTRY
- Diagnosis of Liposcelis entomophila (Insecta: Psocodea: Liposcelididae) based on morphological characteristics and DNA barcodes
- (2011) Qianqian Yang et al. JOURNAL OF STORED PRODUCTS RESEARCH
- MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
- (2011) K. Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Transcriptomics of the Bed Bug (Cimex lectularius)
- (2011) Xiaodong Bai et al. PLoS One
- Evolution of Hsp70 Gene Expression: A Role for Changes in AT-Richness within Promoters
- (2011) Bing Chen et al. PLoS One
- Transcriptome Analysis of the Oriental Fruit Fly (Bactrocera dorsalis)
- (2011) Guang-Mao Shen et al. PLoS One
- Characterization of the Purified Glutathione S-transferases from Two Psocids Liposcelis bostrychophila and L. entomophila
- (2010) Wei DOU et al. Agricultural Sciences in China
- Rickettsia felis Infection in a Common Household Insect Pest, Liposcelis bostrychophila (Psocoptera: Liposcelidae)
- (2010) A. Behar et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Psocid: A new risk for global food security and safety
- (2010) Muhammad Shoaib Ahmedani et al. APPLIED ENTOMOLOGY AND ZOOLOGY
- Comparative studies of acetylcholinesterase purified from three field populations of Liposcelis entomophila (enderlein) (psocoptera: liposcelididae)
- (2010) Li-Sha Xiao et al. ARCHIVES OF INSECT BIOCHEMISTRY AND PHYSIOLOGY
- De novo characterization of a whitefly transcriptome and analysis of its gene expression during development
- (2010) Xiao-Wei Wang et al. BMC GENOMICS
- Decreased detoxification genes and genome size make the human body louse an efficient model to study xenobiotic metabolism
- (2010) S. H. Lee et al. INSECT MOLECULAR BIOLOGY
- Metabolic enzymes associated with xenobiotic and chemosensory responses inNasonia vitripennis
- (2010) J. G. Oakeshott et al. INSECT MOLECULAR BIOLOGY
- Rapid Microsatellite Isolation from a Butterfly by De Novo Transcriptome Sequencing: Performance and a Comparison with AFLP-Derived Distances
- (2010) Alexander S. Mikheyev et al. PLoS One
- Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle
- (2010) E. F. Kirkness et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Phylogeny and classification of the Psocodea, with particular reference to the lice (Psocodea: Phthiraptera)
- (2010) C. H. C. Lyal SYSTEMATIC ENTOMOLOGY
- Purification and partial characterization of glutathioneS-transferase from insecticide-resistant field populations ofLiposcelis paetaPearman (Psocoptera: Liposcelididae)
- (2009) Shuang Wu et al. ARCHIVES OF INSECT BIOCHEMISTRY AND PHYSIOLOGY
- SNP detection for massively parallel whole-genome resequencing
- (2009) R. Li et al. GENOME RESEARCH
- Temporospatial Distribution of the Psocids Liposcelis entomophila and L. decolor (Psocoptera: Liposcelididae) in Steel Bins Containing Wheat
- (2009) G. P. Opit et al. JOURNAL OF ECONOMIC ENTOMOLOGY
- Sequencing technologies — the next generation
- (2009) Michael L. Metzker NATURE REVIEWS GENETICS
- Potential of piperonyl butoxide-synergised pyrethrins against psocids (Psocoptera: Liposcelididae) for stored-grain protection
- (2009) Manoj K Nayak PEST MANAGEMENT SCIENCE
- Different evolutionary lineages of large and small heat shock proteins in eukaryotes
- (2008) Li-Hua Huang et al. CELL RESEARCH
- Differential Heat Shock Tolerance and Expression of Heat-Inducible Proteins in Two Stored-Product Psocids
- (2008) R. N. C. Guedes et al. JOURNAL OF ECONOMIC ENTOMOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started