The Transporter Classification Database

Topological and phylogenetic analyses of bacterial holin families and superfamilies

(2013) Bhaskara L. Reddy et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Bioinformatic analyses of integral membrane transport proteins encoded within the genome of the planctomycetes species, Rhodopirellula baltica

(2013) Philipp Paparoditis et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Evolutionary relationships of ATP-Binding Cassette (ABC) uptake porters

(2013) Wei Hao Zheng et al.   BMC MICROBIOLOGY

The transporter-opsin-G protein-coupled receptor (TOG) superfamily

(2013) Daniel C. Yee et al.   FEBS Journal

The ABCs of membrane transporters in health and disease (SLC series): Introduction

(2013) Matthias A. Hediger et al.   MOLECULAR ASPECTS OF MEDICINE

Evolutionary relationship between 5+5 and 7+7 inverted repeat folds within the amino acid-polyamine-organocation superfamily

(2013) Åke Västermark et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Medicago truncatula transporter database: a comprehensive database resource for M. truncatula transporters

(2012) Zhenyan Miao et al.   BMC GENOMICS

BioV Suite - a collection of programs for the study of transport protein evolution

(2012) Vamsee S. Reddy et al.   FEBS Journal

The major facilitator superfamily (MFS) revisited

(2012) Vamsee S. Reddy et al.   FEBS Journal

Phylogenetic Characterization of Transport Protein Superfamilies: Superiority of SuperfamilyTree Programs over Those Based on Multiple Alignments

(2012) Jonathan S. Chen et al.   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

The Amino Acid-Polyamine-Organocation Superfamily

(2012) Foon H. Wong et al.   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

The RCSB Protein Data Bank: new resources for research and education

(2012) Peter W. Rose et al.   NUCLEIC ACIDS RESEARCH

EcoGene 3.0

(2012) Jindan Zhou et al.   NUCLEIC ACIDS RESEARCH

Update on activities at the Universal Protein Resource (UniProt) in 2013

(2012)   NUCLEIC ACIDS RESEARCH

Comparative analyses of transport proteins encoded within the genomes of Mycobacterium tuberculosis and Mycobacterium leprae

(2011) Jiwon Youm et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Bioinformatic characterization of the 4-Toluene Sulfonate Uptake Permease (TSUP) family of transmembrane proteins

(2011) Maksim A. Shlykov et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Pathways of transport protein evolution: recent advances

(2011) Vincent H. Lam et al.   BIOLOGICAL CHEMISTRY

Functional specialization in nucleotide sugar transporters occurred through differentiation of the gene cluster EamA (DUF6) before the radiation of Viridiplantae

(2011) Åke Västermark et al.   BMC EVOLUTIONARY BIOLOGY

Evolution of the Oligopeptide Transporter Family

(2011) Kenny M. Gomolplitinant et al.   JOURNAL OF MEMBRANE BIOLOGY

Bioinformatic Characterization of the Trimeric Intracellular Cation-Specific Channel Protein Family

(2011) Abe L. F. Silverio et al.   JOURNAL OF MEMBRANE BIOLOGY

Trends in the exploitation of novel drug targets

(2011) Mathias Rask-Andersen et al.   NATURE REVIEWS DRUG DISCOVERY

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

(2011) K. D. Pruitt et al.   NUCLEIC ACIDS RESEARCH

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis, its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control

(2011) Robert S Coyne et al.   GENOME BIOLOGY

YTPdb: A wiki database of yeast membrane transporters

(2010) Sylvain Brohée et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Identifying Relevant Data for a Biological Database: Handcrafted Rules versus Machine Learning

(2010) A K Sehgal et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Defense Against Cannibalism: The SdpI Family of Bacterial Immunity/Signal Transduction Proteins

(2010) Tatyana Leonidovna Povolotsky et al.   JOURNAL OF MEMBRANE BIOLOGY

The Autoinducer-2 Exporter Superfamily

(2010) Rachael E. Rettner et al.   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

The P-Type ATPase Superfamily

(2010) Henry Chan et al.   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

DrugBank 3.0: a comprehensive resource for 'Omics' research on drugs

(2010) C. Knox et al.   NUCLEIC ACIDS RESEARCH

Entrez Gene: gene-centered information at NCBI

(2010) D. Maglott et al.   NUCLEIC ACIDS RESEARCH

The Bacterial Intimins and Invasins: A Large and Novel Family of Secreted Proteins

(2010) Jennifer C. Tsai et al.   PLoS One

Comprehensive Analyses of Transport Proteins Encoded Within the Genome of “Aromatoleum aromaticum” Strain EbN1

(2009) Dorjee G. Tamang et al.   JOURNAL OF MEMBRANE BIOLOGY

Membrane Porters of ATP-Binding Cassette Transport Systems Are Polyphyletic

(2009) Bin Wang et al.   JOURNAL OF MEMBRANE BIOLOGY

Bioinformatic Characterization of P-Type ATPases Encoded Within the Fully Sequenced Genomes of 26 Eukaryotes

(2009) Mark D. Thever et al.   JOURNAL OF MEMBRANE BIOLOGY

Bioinformatic Analyses of Transmembrane Transport: Novel Software for Deducing Protein Phylogeny, Topology, and Evolution

(2009) Ming Ren Yen et al.   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

Biophysical dissection of membrane proteins

(2009) Stephen H. White   NATURE

SPOCTOPUS: a combined predictor of signal peptides and membrane protein topology

(2008) Håkan Viklund et al.   BIOINFORMATICS

The Transporter Classification Database: recent advances

(2008) M. H. Saier et al.   NUCLEIC ACIDS RESEARCH

A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans

(2008) Mircea Podar et al.   GENOME BIOLOGY