The RCSB Protein Data Bank: new resources for research and education

Detection of Spatial Correlations in Protein Structures and Molecular Complexes

(2012) Manfred J. Sippl et al.   STRUCTURE

Substrate Specificity within a Family of Outer Membrane Carboxylate Channels

(2012) Elif Eren et al.   PLOS BIOLOGY

Protein Data Bank Japan (PDBj): maintaining a structural data archive and resource description framework format

(2011) A. R. Kinjo et al.   NUCLEIC ACIDS RESEARCH

Structural and functional insights into DNA-end processing by the archaeal HerA helicase–NurA nuclease complex

(2011) John K. Blackwood et al.   NUCLEIC ACIDS RESEARCH

PDBe: Protein Data Bank in Europe

(2011) S. Velankar et al.   NUCLEIC ACIDS RESEARCH

Reorganizing the protein space at the Universal Protein Resource (UniProt)

(2011)   NUCLEIC ACIDS RESEARCH

The Gene Ontology: enhancements for 2011

(2011)   NUCLEIC ACIDS RESEARCH

Database resources of the National Center for Biotechnology Information

(2011) E. W. Sayers et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

Pre-calculated protein structure alignments at the RCSB PDB website: Fig. 1.

(2010) Andreas Prlić et al.   BIOINFORMATICS

Promoting a structural view of biology for varied audiences: an overview of RCSB PDB resources and experiences

(2010) Shuchismita Dutta et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Jmol– a paradigm shift in crystallographic visualization

(2010) Robert M. Hanson   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Extending CATH: increasing coverage of the protein structure universe and linking structure with function

(2010) A. L. Cuff et al.   NUCLEIC ACIDS RESEARCH

EMDataBank.org: unified data resource for CryoEM

(2010) C. L. Lawson et al.   NUCLEIC ACIDS RESEARCH

The RCSB Protein Data Bank: redesigned web site and web services

(2010) P. W. Rose et al.   NUCLEIC ACIDS RESEARCH

Drawing the PDB: Protein−Ligand Complexes in Two Dimensions

(2010) Katrin Stierand et al.   ACS Medicinal Chemistry Letters

Will Widgets and Semantic Tagging Change Computational Biology?

(2010) Philip E. Bourne et al.   PLoS Computational Biology

Advances and pitfalls of protein structural alignment

(2009) Hitomi Hasegawa et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Generating Triangulated Macromolecular Surfaces by Euclidean Distance Transform

(2009) Dong Xu et al.   PLoS One

The Transporter Classification Database: recent advances

(2008) M. H. Saier et al.   NUCLEIC ACIDS RESEARCH

Interesting Structures: Education and Outreach at the RCSB Protein Data Bank

(2008) Christine Zardecki   PLOS BIOLOGY