Bulk De Novo Mitogenome Assembly from Pooled Total DNA Elucidates the Phylogeny of Weevils (Coleoptera: Curculionoidea)

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny

(2013) Stephen L. Cameron   Annual Review of Entomology

Cnidarian phylogenetic relationships as revealed by mitogenomics

(2013) Ehsan Kayal et al.   BMC EVOLUTIONARY BIOLOGY

The complete mitochondrial genome of a turbinid vetigastropod from MiSeq Illumina sequencing of genomic DNA and steps towards a resolved gastropod phylogeny

(2013) S.T. Williams et al.   GENE

Deep Sequencing of Mixed Total DNA without Barcodes Allows Efficient Assembly of Highly Plastic Ascidian Mitochondrial Genomes

(2013) Nimrod D. Rubinstein et al.   Genome Biology and Evolution

Mitogenomics at the base of Metazoa

(2013) Hans-Jürgen Osigus et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Next-generation sequencing and phylogenetic signal of complete mitochondrial genomes for resolving the evolutionary history of leaf-nosed bats (Phyllostomidae)

(2013) Fidel Botero-Castro et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Molecular dating of phylogenies by likelihood methods: A comparison of models and a new information criterion

(2013) Emmanuel Paradis   MOLECULAR PHYLOGENETICS AND EVOLUTION

Mitogenome sequences stabilize the phylogenetics of weevils (Curculionoidea) and establish the monophyly of larval ectophagy

(2013) Julien Haran et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A comprehensive analysis of bilaterian mitochondrial genomes and phylogeny

(2013) Matthias Bernt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A Mitogenomic Phylogeny of Living Primates

(2013) Knut Finstermeier et al.   PLoS One

Mitochondrial genome diversity and population structure of the giant squid Architeuthis: genetics sheds new light on one of the most enigmatic marine species

(2013) I. Winkelmann et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

(2012) Y. Peng et al.   BIOINFORMATICS

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

(2012) R. Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

A mitochondrial genome phylogeny of termites (Blattodea: Termitoidae): Robust support for interfamilial relationships and molecular synapomorphies define major clades

(2012) Stephen L. Cameron et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

What is the phylogenetic signal limit from mitogenomes? The reconciliation between mitochondrial and nuclear data in the Insecta class phylogeny

(2011) Gerard Talavera et al.   BMC EVOLUTIONARY BIOLOGY

Circumventing Heterozygosity: Sequencing the Amplified Genome of a Single HaploidDrosophila melanogasterEmbryo

(2011) Charles H. Langley et al.   GENETICS

Evolution of Modern Birds Revealed by Mitogenomics: Timing the Radiation and Origin of Major Orders

(2011) M. A. Pacheco et al.   MOLECULAR BIOLOGY AND EVOLUTION

The age and phylogeny of wood boring weevils and the origin of subsociality

(2011) Bjarte H. Jordal et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Family-Group Names In Coleoptera (Insecta)

(2011) Patrice Bouchard et al.   ZooKeys

Comparative mitogenomics of Braconidae (Insecta: Hymenoptera) and the phylogenetic utility of mitochondrial genomes with special reference to Holometabolous insects

(2010) Shu-jun Wei et al.   BMC GENOMICS

Revisiting the Insect Mitochondrial Molecular Clock: The Mid-Aegean Trench Calibration

(2010) A. Papadopoulou et al.   MOLECULAR BIOLOGY AND EVOLUTION

Nucleotide substitution rates for the full set of mitochondrial protein-coding genes in Coleoptera

(2010) Joan Pons et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Why barcode? High-throughput multiplex sequencing of mitochondrial genomes for molecular systematics

(2010) M. J. T. N. Timmermans et al.   NUCLEIC ACIDS RESEARCH

Can higher-level phylogenies of weevils explain their evolutionary success? A critical review

(2010) NICO M. FRANZ et al.   SYSTEMATIC ENTOMOLOGY

When phylogenetic assumptions are violated: base compositional heterogeneity and among-site rate variation in beetle mitochondrial phylogenomics

(2010) HOJUN SONG et al.   SYSTEMATIC ENTOMOLOGY

Temporal lags and overlap in the diversification of weevils and flowering plants

(2009) D. D. McKenna et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nonstationary Evolution and Compositional Heterogeneity in Beetle Mitochondrial Phylogenomics

(2009) Nathan C. Sheffield et al.   SYSTEMATIC BIOLOGY

A Comparative Analysis of Mitochondrial Genomes in Coleoptera (Arthropoda: Insecta) and Genome Descriptions of Six New Beetles

(2008) N. C. Sheffield et al.   MOLECULAR BIOLOGY AND EVOLUTION

Towards the phylogeny of the Curculionoidea (Coleoptera): Reconstructions from mitochondrial and nuclear ribosomal DNA sequences

(2008) Anna K. Hundsdoerfer et al.   ZOOLOGISCHER ANZEIGER