Signals triggering prophage induction in the gut microbiota

Genomewide transcriptional response of Escherichia coli O157:H7 to norepinephrine

(2022) Vijay K. Sharma et al.   BMC GENOMICS

The bacterial toxin colibactin triggers prophage induction

(2022) Justin E. Silpe et al.   NATURE

Phages in the Gut Ecosystem

(2022) Michele Zuppi et al.   Frontiers in Cellular and Infection Microbiology

Extensive gut virome variation and its associations with host and environmental factors in a population-level cohort

(2022) Suguru Nishijima et al.   Nature Communications

Common Oral Medications Lead to Prophage Induction in Bacterial Isolates from the Human Gut

(2021) Steven G. Sutcliffe et al.   Viruses-Basel

Gut microbiome ADP-ribosyltransferases are widespread phage-encoded fitness factors

(2021) Eric M. Brown et al.   Cell Host & Microbe

A catalog of tens of thousands of viruses from human metagenomes reveals hidden associations with chronic diseases

(2021) Michael J. Tisza et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Escherichia coli Shiga Toxins and Gut Microbiota Interactions

(2021) Kyung-Soo Lee et al.   Toxins

The Human Gut Phageome: Origins and Roles in the Human Gut Microbiome

(2021) Eleanor M. Townsend et al.   Frontiers in Cellular and Infection Microbiology

Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome

(2021) Stephen Nayfach et al.   Nature Microbiology

Intestinal Bacteriophage Therapy: Looking for Optimal Efficacy

(2021) François Javaudin et al.   CLINICAL MICROBIOLOGY REVIEWS

Prophage Activation in the Intestine: Insights Into Functions and Possible Applications

(2021) Jie Hu et al.   Frontiers in Microbiology

Dormant phages communicate via arbitrium to control exit from lysogeny

(2021) Nitzan Aframian et al.   Nature Microbiology

New insights into intestinal phages

(2020) R. Sausset et al.   Mucosal Immunology

Virulent coliphages in 1-year-old children fecal samples are fewer, but more infectious than temperate coliphages

(2020) Aurélie Mathieu et al.   Nature Communications

Dietary prophage inducers and antimicrobials: toward landscaping the human gut microbiome

(2020) Lance Boling et al.   Gut Microbes

Engineered Fluorescent E. coli Lysogens Allow Live-Cell Imaging of Functional Prophage Induction Triggered inside Macrophages

(2020) Katie Bodner et al.   Cell Systems

The Genotoxin Colibactin Shapes Gut Microbiota in Mice

(2020) Sophie Tronnet et al.   mSphere

Dietary Fructose and Microbiota-Derived Short-Chain Fatty Acids Promote Bacteriophage Production in the Gut Symbiont Lactobacillus reuteri

(2019) Jee-Hwan Oh et al.   Cell Host & Microbe

Enterococcus faecalis Countermeasures Defeat a Virulent Picovirinae Bacteriophage

(2019) Julien Lossouarn et al.   Viruses-Basel

Phages Mediate Bacterial Self-Recognition

(2019) Sooyeon Song et al.   Cell Reports

Quorum Sensing and Metabolic State of the Host Control Lysogeny-Lysis Switch of Bacteriophage T1

(2019) Leanid Laganenka et al.   mBio

Prophages in Lactobacillus reuteri Are Associated with Fitness Trade-Offs but Can Increase Competitiveness in the Gut Ecosystem

(2019) Jee-Hwan Oh et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A Putative Microcin Amplifies Shiga Toxin 2a Production of Escherichia coli O157:H7

(2019) Hillary M. Mosso et al.   JOURNAL OF BACTERIOLOGY

Virus-borne mini-CRISPR arrays are involved in interviral conflicts

(2019) Sofia Medvedeva et al.   Nature Communications

Whole-Virome Analysis Sheds Light on Viral Dark Matter in Inflammatory Bowel Disease

(2019) Adam G. Clooney et al.   Cell Host & Microbe

The enemy from within: a prophage of Roseburia intestinalis systematically turns lytic in the mouse gut, driving bacterial adaptation by CRISPR spacer acquisition

(2019) Jeffrey K. Cornuault et al.   ISME Journal

Lysogeny is prevalent and widely distributed in the murine gut microbiota

(2018) Min-Soo Kim et al.   ISME Journal

NADPH oxidases and ROS signaling in the gastrointestinal tract

(2018) Gabriella Aviello et al.   Mucosal Immunology

Phages infecting Faecalibacterium prausnitzii belong to novel viral genera that help to decipher intestinal viromes

(2018) Jeffrey K. Cornuault et al.   Microbiome

A Host-Produced Quorum-Sensing Autoinducer Controls a Phage Lysis-Lysogeny Decision

(2018) Justin E. Silpe et al.   CELL

Communication between viruses guides lysis–lysogeny decisions

(2017) Zohar Erez et al.   NATURE

Inflammation boosts bacteriophage transfer between Salmonella spp.

(2017) Médéric Diard et al.   SCIENCE

Carriage of λ Latent Virus Is Costly for Its Bacterial Host due to Frequent Reactivation in Monoxenic Mouse Intestine

(2016) Marianne De Paepe et al.   PLoS Genetics

Vitamin B12 Uptake by the Gut Commensal Bacteria Bacteroides thetaiotaomicron Limits the Production of Shiga Toxin by Enterohemorrhagic Escherichia coli

(2016) Charlotte Cordonnier et al.   Toxins

Intestinal Short Chain Fatty Acids and their Link with Diet and Human Health

(2016) David Ríos-Covián et al.   Frontiers in Microbiology

Disease-Specific Alterations in the Enteric Virome in Inflammatory Bowel Disease

(2015) Jason M. Norman et al.   CELL

Divergent responses of viral and bacterial communities in the gut microbiome to dietary disturbances in mice

(2015) Adina Howe et al.   ISME Journal

Phage-mediated Dispersal of Biofilm and Distribution of Bacterial Virulence Genes Is Induced by Quorum Sensing

(2015) Friederike S. Rossmann et al.   PLoS Pathogens

Phenethyl Isothiocyanate Inhibits Shiga Toxin Production in Enterohemorrhagic Escherichia coli by Stringent Response Induction

(2014) Dariusz Nowicki et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Survival, prophage induction, and invasive properties of lysogenic Salmonella Typhimurium exposed to simulated gastrointestinal conditions

(2014) Songrae Kim et al.   ARCHIVES OF MICROBIOLOGY

The CJIE1 prophage of Campylobacter jejuni affects protein expression in growth media with and without bile salts

(2014) Clifford G Clark et al.   BMC MICROBIOLOGY

Impact of Spontaneous Prophage Induction on the Fitness of Bacterial Populations and Host-Microbe Interactions

(2014) Arun M. Nanda et al.   JOURNAL OF BACTERIOLOGY

Bacteriophages: an underestimated role in human and animal health?

(2014) Marianne De Paepe et al.   Frontiers in Cellular and Infection Microbiology

Xenobiotics Shape the Physiology and Gene Expression of the Active Human Gut Microbiome

(2013) Corinne Ferrier Maurice et al.   CELL

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

Prophage Induction Is Enhanced and Required for Renal Disease and Lethality in an EHEC Mouse Model

(2013) Jessica S. Tyler et al.   PLoS Pathogens

A composite bacteriophage alters colonization by an intestinal commensal bacterium

(2012) B. A. Duerkop et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ethanolamine Controls Expression of Genes Encoding Components Involved in Interkingdom Signaling and Virulence in Enterohemorrhagic Escherichia coli O157:H7

(2012) M. M. Kendall et al.   mBio

The human gut virome: Inter-individual variation and dynamic response to diet

(2011) S. Minot et al.   GENOME RESEARCH

Hydrogen peroxide-mediated induction of the Shiga toxinconverting lambdoid prophage ST2-8624 inEscherichia coliO157:H7

(2010) Joanna M. Łoś et al.   FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY

Viruses in the faecal microbiota of monozygotic twins and their mothers

(2010) Alejandro Reyes et al.   NATURE

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

(2010) C. De Filippo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Clostridium difficile—A continually evolving and problematic pathogen

(2009) Lisa F. Dawson et al.   INFECTION GENETICS AND EVOLUTION

The QseC Adrenergic Signaling Cascade in Enterohemorrhagic E. coli (EHEC)

(2009) David T. Hughes et al.   PLoS Pathogens

Human Microbiota-Secreted Factors Inhibit Shiga Toxin Synthesis by Enterohemorrhagic Escherichia coli O157:H7

(2008) T. de Sablet et al.   INFECTION AND IMMUNITY

Culture of Campylobacter jejuni with Sodium Deoxycholate Induces Virulence Gene Expression

(2008) P. Malik-Kale et al.   JOURNAL OF BACTERIOLOGY