标题
Genome chaos: Creating new genomic information essential for cancer macroevolution
作者
关键词
Genome theory, Karyotype coding, Phase transition, Punctuated cellular macroevolution, Two phased cancer evolution
出版物
SEMINARS IN CANCER BIOLOGY
Volume 81, Issue -, Pages 160-175
出版商
Elsevier BV
发表日期
2020-11-13
DOI
10.1016/j.semcancer.2020.11.003
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- The Biophysics of Regenerative Repair Suggests New Perspectives on Biological Causation
- (2020) Michael Levin BIOESSAYS
- Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition
- (2020) Bernardo Rodriguez-Martin et al. NATURE GENETICS
- “Mitotic Slippage” and Extranuclear DNA in Cancer Chemoresistance: A Focus on Telomeres
- (2020) Kristine Salmina et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Convergent Evolution, Evolving Evolvability, and the Origins of Lethal Cancer
- (2020) Kenneth J. Pienta et al. MOLECULAR CANCER RESEARCH
- Mechanisms generating cancer genome complexity from a single cell division error
- (2020) Neil T. Umbreit et al. SCIENCE
- Somatic Genomic Mosaicism in Multiple Myeloma
- (2020) Christine J. Ye et al. Frontiers in Genetics
- Origins and Consequences of Chromosomal Instability: From Cellular Adaptation to Genome Chaos-Mediated System Survival
- (2020) Christine J. Ye et al. Genes
- Nonclonal Chromosome Aberrations and Genome Chaos in Somatic and Germ Cells from Patients and Survivors of Hodgkin Lymphoma
- (2019) Sara Frias et al. Genes
- The Cancer Aneuploidy Paradox: In the Light of Evolution
- (2019) Kristine Salmina et al. Genes
- No genome is an island: toward a 21st century agenda for evolution
- (2019) James A. Shapiro Annals of the New York Academy of Sciences
- Aneuploidy drives lethal progression in prostate cancer
- (2019) Konrad H. Stopsack et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Micronuclei and Genome Chaos: Changing the System Inheritance
- (2019) Christine J. Ye et al. Genes
- Illegitimate and Repeated Genomic Integration of Cell-Free Chromatin in the Aetiology of Somatic Mosaicism, Ageing, Chronic Diseases and Cancer
- (2019) Raghuram et al. Genes
- Polyploid giant cancer cells: Unrecognized actuators of tumorigenesis, metastasis, and resistance
- (2019) Sarah R. Amend et al. PROSTATE
- The “life code”: a theory that unifies the human life cycle and the origin of human tumors
- (2019) Liu Jinsong SEMINARS IN CANCER BIOLOGY
- Nonclonal chromosomal alterations and poor survival in cytopenic patients without hematological malignancies
- (2019) Osamu Imataki et al. Molecular Cytogenetics
- Eukaryote hybrid genomes
- (2019) Anna Runemark et al. PLoS Genetics
- What Is Karyotype Coding and Why Is Genomic Topology Important for Cancer and Evolution?
- (2019) Christine J. Ye et al. Frontiers in Genetics
- Cancer-Derived Extracellular Vesicle-Associated MicroRNAs in Intercellular Communication: One Cell’s Trash Is Another Cell’s Treasure
- (2019) Joseph Mills et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- A Postgenomic Perspective on Molecular Cytogenetics
- (2018) Henry H. Heng et al. CURRENT GENOMICS
- Detecting Chromosome Condensation Defects in Gulf War Illness Patients
- (2018) Guo Liu et al. CURRENT GENOMICS
- The Dualistic Origin of Human Tumors
- (2018) Jinsong Liu SEMINARS IN CANCER BIOLOGY
- Understanding aneuploidy in cancer through the lens of system inheritance, fuzzy inheritance and emergence of new genome systems
- (2018) Christine J. Ye et al. Molecular Cytogenetics
- Extensive Karyotype Reorganization in the Fish Gymnotus arapaima (Gymnotiformes, Gymnotidae) Highlighted by Zoo-FISH Analysis
- (2018) Milla de Andrade Machado et al. Frontiers in Genetics
- Genomic chaos in peripheral blood lymphocytes of Hodgkin's lymphoma patients one year after ABVD chemotherapy/radiotherapy
- (2018) Sandra Ramos et al. ENVIRONMENTAL AND MOLECULAR MUTAGENESIS
- Karyotype engineering by chromosome fusion leads to reproductive isolation in yeast
- (2018) Jingchuan Luo et al. NATURE
- Creating a functional single-chromosome yeast
- (2018) Yangyang Shao et al. NATURE
- Liquid Nuclear Condensates Mechanically Sense and Restructure the Genome
- (2018) Yongdae Shin et al. CELL
- Nonclonal Chromosomal Aberrations in Childhood Leukemia Survivors
- (2018) Tong Foh Chin et al. Fetal and Pediatric Pathology
- Chromothripsis is linked to TP53 alteration, cell cycle impairment, and dismal outcome in acute myeloid leukemia with complex karyotype
- (2017) Frank G. Rücker et al. HAEMATOLOGICA
- cGAS surveillance of micronuclei links genome instability to innate immunity
- (2017) Karen J. Mackenzie et al. NATURE
- Reconstructing the genome of the most recent common ancestor of flowering plants
- (2017) Florent Murat et al. NATURE GENETICS
- The evolutionary significance of polyploidy
- (2017) Yves Van de Peer et al. NATURE REVIEWS GENETICS
- Tracking the Evolution of Non–Small-Cell Lung Cancer
- (2017) Mariam Jamal-Hanjani et al. NEW ENGLAND JOURNAL OF MEDICINE
- Tissue- and Condition-Specific Isoforms of Mammalian Cytochrome c Oxidase Subunits: From Function to Human Disease
- (2017) Christopher A. Sinkler et al. Oxidative Medicine and Cellular Longevity
- Reconstruction and evolutionary history of eutherian chromosomes
- (2017) Jaebum Kim et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Altered interactions between unicellular and multicellular genes drive hallmarks of transformation in a diverse range of solid tumors
- (2017) Anna S. Trigos et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Tumor aneuploidy correlates with markers of immune evasion and with reduced response to immunotherapy
- (2017) Teresa Davoli et al. SCIENCE
- Differences between germline and somatic mutation rates in humans and mice
- (2017) Brandon Milholland et al. Nature Communications
- Entosis Is Induced by Glucose Starvation
- (2017) Jens C. Hamann et al. Cell Reports
- Chromothripsis is linked to TP53 alteration, cell cycle impairment, and dismal outcome in acute myeloid leukemia with complex karyotype
- (2017) Frank G. Rücker et al. HAEMATOLOGICA
- New Insights in the Cytogenetic Practice: Karyotypic Chaos, Non-Clonal Chromosomal Alterations and Chromosomal Instability in Human Cancer and Therapy Response
- (2017) Nelson Rangel et al. Genes
- The Role of Chromosomal Instability in Cancer and Therapeutic Responses
- (2017) Natalia Vargas-Rondón et al. Cancers
- Cellular information dynamics through transmembrane flow of ions
- (2017) Robert A. Gatenby et al. Scientific Reports
- How to rule the nucleus: divide et impera
- (2016) Irina Solovei et al. CURRENT OPINION IN CELL BIOLOGY
- Chromosome abnormalities at onset of complete remission are associated with worse outcome in patients with acute myeloid leukemia and an abnormal karyotype at diagnosis: CALGB 8461 (Alliance)
- (2016) C. Niederwieser et al. HAEMATOLOGICA
- Heterogeneity-mediated cellular adaptation and its trade-off: searching for the general principles of diseases
- (2016) Henry H. Heng JOURNAL OF EVALUATION IN CLINICAL PRACTICE
- New paradigms in clonal evolution: punctuated equilibrium in cancer
- (2016) William CH Cross et al. JOURNAL OF PATHOLOGY
- A renewed model of pancreatic cancer evolution based on genomic rearrangement patterns
- (2016) Faiyaz Notta et al. NATURE
- Chromosome thripsis by DNA double strand break clusters causes enhanced cell lethality, chromosomal translocations and 53BP1-recruitment
- (2016) Agnes Schipler et al. NUCLEIC ACIDS RESEARCH
- The tandem duplicator phenotype as a distinct genomic configuration in cancer
- (2016) Francesca Menghi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Toward a theory of organisms: Three founding principles in search of a useful integration
- (2016) Ana M. Soto et al. PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY
- Genome Stability and Evolution: Attempting a Holistic View
- (2016) Ingo Schubert et al. TRENDS IN PLANT SCIENCE
- Why it is crucial to analyze non clonal chromosome aberrations or NCCAs?
- (2016) Henry H. Q. Heng et al. Molecular Cytogenetics
- Cytogenetically visible copy number variations (CG-CNVs) in banding and molecular cytogenetics of human; about heteromorphisms and euchromatic variants
- (2016) Thomas Liehr Molecular Cytogenetics
- Genomics of Rapid Incipient Speciation in Sympatric Threespine Stickleback
- (2016) David A. Marques et al. PLoS Genetics
- Chromosome abnormalities at onset of complete remission are associated with worse outcome in patients with acute myeloid leukemia and an abnormal karyotype at diagnosis: CALGB 8461 (Alliance)
- (2016) C. Niederwieser et al. HAEMATOLOGICA
- Linking genomic reorganization to tumor initiation via the giant cell cycle
- (2016) N Niu et al. Oncogenesis
- Is post-polyploidization diploidization the key to the evolutionary success of angiosperms?
- (2015) Steven Dodsworth et al. BOTANICAL JOURNAL OF THE LINNEAN SOCIETY
- Polyploidy
- (2015) Laura E. Frawley et al. CURRENT BIOLOGY
- HEK293 in cell biology and cancer research: phenotype, karyotype, tumorigenicity, and stress-induced genome-phenotype evolution
- (2015) A.A. Stepanenko et al. GENE
- Chromothripsis from DNA damage in micronuclei
- (2015) Cheng-Zhong Zhang et al. NATURE
- A Big Bang model of human colorectal tumor growth
- (2015) Andrea Sottoriva et al. NATURE GENETICS
- Chromosome mis-segregation and cytokinesis failure in trisomic human cells
- (2015) Joshua M Nicholson et al. eLife
- Coming Full Circle—From Endless Complexity to Simplicity and Back Again
- (2014) Robert A. Weinberg CELL
- Genome chaos: Survival strategy during crisis
- (2014) Guo Liu et al. CELL CYCLE
- Evolution of the Cancer Stem Cell Model
- (2014) Antonija Kreso et al. Cell Stem Cell
- First principles of Hamiltonian medicine
- (2014) B. Crespi et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Distinguishing constitutional and acquired nonclonal aneuploidy
- (2014) H. H. Heng PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Stress, genomic adaptation, and the evolutionary trade-off
- (2014) Steven D. Horne et al. Frontiers in Genetics
- Chromosomal instability and transcriptome dynamics in cancer
- (2013) Joshua B. Stevens et al. CANCER AND METASTASIS REVIEWS
- Genetic and non-genetic instability in tumor progression: link between the fitness landscape and the epigenetic landscape of cancer cells
- (2013) Sui Huang CANCER AND METASTASIS REVIEWS
- Aneuploidy and chromosomal instability: a vicious cycle driving cellular evolution and cancer genome chaos
- (2013) Tamara A. Potapova et al. CANCER AND METASTASIS REVIEWS
- Chromosomal instability (CIN): what it is and why it is crucial to cancer evolution
- (2013) Henry H. Heng et al. CANCER AND METASTASIS REVIEWS
- Punctuated Evolution of Prostate Cancer Genomes
- (2013) Sylvan C. Baca et al. CELL
- Single cell heterogeneity
- (2013) Batoul Y Abdallah et al. CELL CYCLE
- Karyotype Heterogeneity and Unclassified Chromosomal Abnormalities
- (2013) H.H.Q. Heng et al. CYTOGENETIC AND GENOME RESEARCH
- Heterogeneity of Cell Death
- (2013) J.B. Stevens et al. CYTOGENETIC AND GENOME RESEARCH
- Unstable genomes elevate transcriptome dynamics
- (2013) Joshua B. Stevens et al. INTERNATIONAL JOURNAL OF CANCER
- Generation of cancer stem-like cells through the formation of polyploid giant cancer cells
- (2013) S Zhang et al. ONCOGENE
- Mitochondrial DNA Genetics and the Heteroplasmy Conundrum in Evolution and Disease
- (2013) D. C. Wallace et al. Cold Spring Harbor Perspectives in Biology
- Position-Effect Variegation, Heterochromatin Formation, and Gene Silencing in Drosophila
- (2013) S. C. R. Elgin et al. Cold Spring Harbor Perspectives in Biology
- New Insights into the Troubles of Aneuploidy
- (2012) Jake J. Siegel et al. Annual Review of Cell and Developmental Biology
- Telomere-Driven Tetraploidization Occurs in Human Cells Undergoing Crisis and Promotes Transformation of Mouse Cells
- (2012) Teresa Davoli et al. CANCER CELL
- Genome Sequencing of Pediatric Medulloblastoma Links Catastrophic DNA Rearrangements with TP53 Mutations
- (2012) Tobias Rausch et al. CELL
- Why imatinib remains an exception of cancer research
- (2012) Steven D. Horne et al. JOURNAL OF CELLULAR PHYSIOLOGY
- Causes and consequences of aneuploidy in cancer
- (2012) David J. Gordon et al. NATURE REVIEWS GENETICS
- Computing life: Add logos to biology and bios to physics
- (2012) Alexey Kolodkin et al. PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY
- Karyotypic Determinants of Chromosome Instability in Aneuploid Budding Yeast
- (2012) Jin Zhu et al. PLoS Genetics
- The tissue organization field theory of cancer: A testable replacement for the somatic mutation theory
- (2011) Ana M. Soto et al. BIOESSAYS
- The role of developmental plasticity and epigenetics in human health
- (2011) Peter D. Gluckman et al. BIRTH DEFECTS RESEARCH PART C-EMBRYO TODAY-REVIEWS
- Formation of solid tumors by a single multinucleated cancer cell
- (2011) Zhang Weihua et al. CANCER
- Massive Genomic Rearrangement Acquired in a Single Catastrophic Event during Cancer Development
- (2011) Philip J. Stephens et al. CELL
- Hallmarks of Cancer: The Next Generation
- (2011) Douglas Hanahan et al. CELL
- Decoding the genome beyond sequencing: The new phase of genomic research
- (2011) Henry H.Q. Heng et al. GENOMICS
- Tumour evolution inferred by single-cell sequencing
- (2011) Nicholas Navin et al. NATURE
- Why don't we get more cancer? A proposed role of the microenvironment in restraining cancer progression
- (2011) Mina J Bissell et al. NATURE MEDICINE
- Malignant fibrous histiocytoma two years after autologous stem cell transplant for Hodgkin lymphoma: Evidence for genomic instability
- (2011) Shanmuganathan Chandrakasan et al. PEDIATRIC BLOOD & CANCER
- Genetic structure and domestication history of the grape
- (2011) Sean Myles et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Diverse system stresses: common mechanisms of chromosome fragmentation
- (2011) J B Stevens et al. Cell Death & Disease
- Are There Laws of Genome Evolution?
- (2011) Eugene V. Koonin PLoS Computational Biology
- The enemy within: An epigenetic role of retrotransposons in cancer initiation
- (2010) Adam S. Wilkins BIOESSAYS
- Persistent Telomere Damage Induces Bypass of Mitosis and Tetraploidy
- (2010) Teresa Davoli et al. CELL
- Illicit survival of cancer cells during polyploidization and depolyploidization
- (2010) I Vitale et al. CELL DEATH AND DIFFERENTIATION
- SEX REDUCES GENETIC VARIATION: A MULTIDISCIPLINARY REVIEW
- (2010) Root Gorelick et al. EVOLUTION
- The ploidy conveyor of mature hepatocytes as a source of genetic variation
- (2010) Andrew W. Duncan et al. NATURE
- Towards predictive stochastic dynamical modeling of cancer genesis and progression
- (2010) P. Ao et al. Interdisciplinary Sciences-Computational Life Sciences
- The genome-centric concept: resynthesis of evolutionary theory
- (2009) Henry H. Q. Heng BIOESSAYS
- Adaptive Therapy
- (2009) R. A. Gatenby et al. CANCER RESEARCH
- THE ANIMAL WITHIN: CARCINOGENESIS AND THE CLONAL EVOLUTION OF CANCER CELLS ARE SPECIATION EVENTS SENSU STRICTO
- (2009) Mark D. Vincent EVOLUTION
- The Evolution of Meiosis From Mitosis
- (2009) A. S. Wilkins et al. GENETICS
- Letting Escherichia coli Teach Me About Genome Engineering
- (2009) James A. Shapiro GENETICS
- Aneuploidy in the normal, Alzheimer's disease and ataxia-telangiectasia brain: Differential expression and pathological meaning
- (2009) Ivan Y. Iourov et al. NEUROBIOLOGY OF DISEASE
- Cancer attractors: A systems view of tumors from a gene network dynamics and developmental perspective
- (2009) Sui Huang et al. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- Endopolyploidy in irradiated p53-deficient tumour cell lines: Persistence of cell division activity in giant cells expressing Aurora-B kinase
- (2008) Jekaterina Erenpreisa et al. CELL BIOLOGY INTERNATIONAL
- The Conflict Between Complex Systems and Reductionism
- (2008) Henry H. Q. Heng JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- Chromosomal mosaicism goes global
- (2008) Ivan Y Iourov et al. Molecular Cytogenetics
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started