Stronger environmental adaptation of rare rather than abundant bacterioplankton in response to dredging in eutrophic Lake Nanhu (Wuhan, China)

Distinct Assembly Mechanisms Underlie Similar Biogeographic Patterns of Rare and Abundant Bacterioplankton in Cascade Reservoirs of a Large River

(2020) Juan Chen et al.   Frontiers in Microbiology

Antagonistic pleiotropy conceals molecular adaptations in changing environments

(2020) Piaopiao Chen et al.   Nature Ecology & Evolution

Distinct assembly mechanisms underlie similar biogeographical patterns of rare and abundant bacteria in Tibetan Plateau grassland soils

(2020) Mukan Ji et al.   ENVIRONMENTAL MICROBIOLOGY

Abundant fungi adapt to broader environmental gradients than rare fungi in agricultural fields

(2020) Shuo Jiao et al.   GLOBAL CHANGE BIOLOGY

Environmental heterogeneity determines the ecological processes that govern bacterial metacommunity assembly in a floodplain river system

(2020) Paula Huber et al.   ISME Journal

Microbial community successions and their dynamic functions during harmful cyanobacterial blooms in a freshwater lake

(2020) Hanyan Li et al.   WATER RESEARCH

Tax4Fun2: prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene sequences

(2020) Franziska Wemheuer et al.   Environmental Microbiome

Dredging mitigates cyanobacterial bloom in eutrophic Lake Nanhu: Shifts in associations between the bacterioplankton community and sediment biogeochemistry

(2020) Wenjie Wan et al.   ENVIRONMENTAL RESEARCH

Community assembly of bacteria and archaea in coastal waters governed by contrasting mechanisms: A seasonal perspective

(2020) Kai Wang et al.   MOLECULAR ECOLOGY

Dispersal limitation driving phoD-harboring bacterial community assembly: A potential indicator for ecosystem multifunctionality in long-term fertilized soils

(2020) Wenjie Wan et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Evolutionary constraints on species diversity in marine bacterioplankton communities

(2019) Hsiao-Pei Lu et al.   ISME Journal

Environment and evolutionary history shape phylogenetic turnover in European tetrapods

(2019) Bianca Saladin et al.   Nature Communications

Convergent estimates of marine nitrogen fixation

(2019) Wei-Lei Wang et al.   NATURE

Environmental filtering determines family-level structure of sulfate-reducing microbial communities in subsurface marine sediments

(2019) Ian P. G. Marshall et al.   ISME Journal

Dual nitrogen and oxygen isotope fractionation during anaerobic ammonium oxidation by anammox bacteria

(2019) Kanae Kobayashi et al.   ISME Journal

Evolutionary history constrains microbial traits across environmental variation

(2019) Ember M. Morrissey et al.   Nature Ecology & Evolution

Responses of the rhizosphere bacterial community in acidic crop soil to pH: Changes in diversity, composition, interaction, and function

(2019) Wenjie Wan et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Soil pH and temperature regulate assembly processes of abundant and rare bacterial communities in agricultural ecosystems

(2019) Shuo Jiao et al.   ENVIRONMENTAL MICROBIOLOGY

Balance between community assembly processes mediates species coexistence in agricultural soil microbiomes across eastern China

(2019) Shuo Jiao et al.   ISME Journal

Seasonal Variability of Conditionally Rare Taxa in the Water Column Bacterioplankton Community of Subtropical Reservoirs in China

(2019) Pascaline Nyirabuhoro et al.   MICROBIAL ECOLOGY

Biogeographic patterns of abundant and rare bacterioplankton in three subtropical bays resulting from selective and neutral processes

(2018) Yuanyuan Mo et al.   ISME Journal

Comparative genomics sheds light on niche differentiation and the evolutionary history of comammox Nitrospira

(2018) Alejandro Palomo et al.   ISME Journal

Cyanobacterial blooms

(2018) Jef Huisman et al.   NATURE REVIEWS MICROBIOLOGY

Ecological suicide in microbes

(2018) Christoph Ratzke et al.   Nature Ecology & Evolution

Dispersal Modifies the Diversity and Composition of Active Bacterial Communities in Response to a Salinity Disturbance

(2018) Dandan Shen et al.   Frontiers in Microbiology

Extrusion of Dissolved Oxygen by Exopolysaccharide From Leuconostoc mesenteroides and Its Implications in Relief of the Oxygen Stress

(2018) Minghui Yan et al.   Frontiers in Microbiology

Desiccation events change the microbial response to gradients of wastewater effluent pollution

(2018) Ferran Romero et al.   WATER RESEARCH

Contribution of different dispersal sources to the metabolic response of lake bacterioplankton following a salinity change

(2017) Jérôme Comte et al.   ENVIRONMENTAL MICROBIOLOGY

Relationship of Microbiota and Cyanobacterial Secondary Metabolites in Planktothricoides-Dominated Bloom

(2017) Shu Harn Te et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Flow velocity-ecology thresholds in Canadian rivers: A comparison of trait and taxonomy-based approaches

(2017) Wendy A. Monk et al.   FRESHWATER BIOLOGY

Contrasting patterns of diversity of abundant and rare bacterioplankton in freshwater lakes along an elevation gradient

(2017) Huabing Li et al.   LIMNOLOGY AND OCEANOGRAPHY

Similar community assembly mechanisms underlie similar biogeography of rare and abundant bacteria in lakes on Yungui Plateau, China

(2017) Jingqiu Liao et al.   LIMNOLOGY AND OCEANOGRAPHY

Microbial Community Structure and Function Decoupling Across a Phosphorus Gradient in Streams

(2017) Erick S. LeBrun et al.   MICROBIAL ECOLOGY

Nearly a decade-long repeatable seasonal diversity patterns of bacterioplankton communities in the eutrophic Lake Donghu (Wuhan, China)

(2017) Qingyun Yan et al.   MOLECULAR ECOLOGY

On the origins of oxygenic photosynthesis and aerobic respiration in Cyanobacteria

(2017) Rochelle M. Soo et al.   SCIENCE

Marine Bacterioplankton Seasonal Succession Dynamics

(2017) Carina Bunse et al.   TRENDS IN MICROBIOLOGY

Climate warming and cyanobacteria blooms: Looks at their relationships from a new perspective

(2017) Xingcheng Yan et al.   WATER RESEARCH

The effect of dissolved oxygen concentration (DO) on oxygen diffusion and bacterial community structure in moving bed sequencing batch reactor (MBSBR)

(2017) Yongfeng Cao et al.   WATER RESEARCH

Discordant temporal turnovers of sediment bacterial and eukaryotic communities in response to dredging: non-resilience and functional changes

(2016) Na Zhang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identifying the microbial taxa that consistently respond to soil warming across time and space

(2016) Angela M. Oliverio et al.   GLOBAL CHANGE BIOLOGY

Interactions between hydrology and water chemistry shape bacterioplankton biogeography across boreal freshwater networks

(2016) Juan Pablo Niño-García et al.   ISME Journal

Groundwater–surface water mixing shifts ecological assembly processes and stimulates organic carbon turnover

(2016) James C. Stegen et al.   Nature Communications

Response of marine bacterioplankton pH homeostasis gene expression to elevated CO2

(2016) Carina Bunse et al.   Nature Climate Change

The role of biology in planetary evolution: cyanobacterial primary production in low-oxygen Proterozoic oceans

(2015) Trinity L. Hamilton et al.   ENVIRONMENTAL MICROBIOLOGY

Predicting microbial traits with phylogenies

(2015) Marta Goberna et al.   ISME Journal

The biogeography of abundant and rare bacterioplankton in the lakes and reservoirs of China

(2015) Lemian Liu et al.   ISME Journal

Microbiomes in light of traits: A phylogenetic perspective

(2015) J. B. H. Martiny et al.   SCIENCE

Swarming bacteria migrate by Lévy Walk

(2015) Gil Ariel et al.   Nature Communications

Stochasticity, succession, and environmental perturbations in a fluidic ecosystem

(2014) Jizhong Zhou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Soil biodiversity and soil community composition determine ecosystem multifunctionality

(2014) C. Wagg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Stochastic and deterministic assembly processes in subsurface microbial communities

(2012) James C Stegen et al.   ISME Journal

In situ substrate preferences of abundant bacterioplankton populations in a prealpine freshwater lake

(2012) Michaela M Salcher et al.   ISME Journal

Phylogenetic conservatism of functional traits in microorganisms

(2012) Adam C Martiny et al.   ISME Journal

Experimentally induced habitat filtering in marine bacterial communities

(2012) M Pontarp et al.   MARINE ECOLOGY PROGRESS SERIES

Influence of Salinity on Bacterioplankton Communities from the Brazilian Rain Forest to the Coastal Atlantic Ocean

(2011) Cynthia B. Silveira et al.   PLoS One

The Importance of Dispersal for Bacterial Community Composition and Functioning

(2011) Eva S. Lindström et al.   PLoS One

Activity of abundant and rare bacteria in a coastal ocean

(2011) B. J. Campbell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Local and regional factors influencing bacterial community assembly

(2011) Eva S. Lindström et al.   Environmental Microbiology Reports

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Stochastic Community Assembly Causes Higher Biodiversity in More Productive Environments

(2010) J. M. Chase   SCIENCE

Short-term bacterial community composition dynamics in response to accumulation and breakdown of Microcystis blooms

(2010) Huabing Li et al.   WATER RESEARCH

Controlling harmful cyanobacterial blooms in a hyper-eutrophic lake (Lake Taihu, China): The need for a dual nutrient (N & P) management strategy

(2010) Hans W. Paerl et al.   WATER RESEARCH

A new method for detecting and interpreting biodiversity and ecological community thresholds

(2010) Matthew E. Baker et al.   Methods in Ecology and Evolution

Phylogenetic beta diversity: linking ecological and evolutionary processes across space in time

(2008) Catherine H. Graham et al.   ECOLOGY LETTERS

High diversity of cultivable heterotrophic bacteria in association with cyanobacterial water blooms

(2008) Katri A Berg et al.   ISME Journal

Detoxification of sulphidic African shelf waters by blooming chemolithotrophs

(2008) Gaute Lavik et al.   NATURE