Interactions between hydrology and water chemistry shape bacterioplankton biogeography across boreal freshwater networks

pH Influences the Importance of Niche-Related and Neutral Processes in Lacustrine Bacterioplankton Assembly

(2015) Lijuan Ren et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Terrestrial origin of bacterial communities in complex boreal freshwater networks

(2015) Clara Ruiz-González et al.   ECOLOGY LETTERS

Environmental rather than spatial factors structure bacterioplankton communities in shallow lakes along a > 6000 km latitudinal gradient in South America

(2015) Caroline Souffreau et al.   ENVIRONMENTAL MICROBIOLOGY

Climate and landscape influence on indicators of lake carbon cycling through spatial patterns in dissolved organic carbon

(2015) Jean-Francois Lapierre et al.   GLOBAL CHANGE BIOLOGY

The quality of organic matter shapes the functional biogeography of bacterioplankton across boreal freshwater ecosystems

(2015) Clara Ruiz-González et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Altitudinal patterns of diversity and functional traits of metabolically active microorganisms in stream biofilms

(2015) Linda Wilhelm et al.   ISME Journal

The biogeography of abundant and rare bacterioplankton in the lakes and reservoirs of China

(2015) Lemian Liu et al.   ISME Journal

Large-scale patterns in summer diffusive CH4fluxes across boreal lakes, and contribution to diffusive C emissions

(2014) Terhi Rasilo et al.   GLOBAL CHANGE BIOLOGY

Catchment-scale biogeography of riverine bacterioplankton

(2014) Daniel S Read et al.   ISME Journal

Microbial diversity and community-environment relationships in boreal streams

(2014) Jani Heino et al.   JOURNAL OF BIOGEOGRAPHY

Characterising Runoff Generation Processes in a Lake-Rich Thermokarst Landscape (Old Crow Flats, Yukon, Canada) using δ18O, δ2H and d-excess Measurements

(2014) Kevin W. Turner et al.   PERMAFROST AND PERIGLACIAL PROCESSES

Metacommunity dynamics of bacteria in an arctic lake: the impact of species sorting and mass effects on bacterial production and biogeography

(2014) Heather E. Adams et al.   Frontiers in Microbiology

The biogeography of stream bacteria

(2013) Gavin Lear et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

A meta-analysis of changes in bacterial and archaeal communities with time

(2013) Ashley Shade et al.   ISME Journal

Headwaters are critical reservoirs of microbial diversity for fluvial networks

(2013) K. Besemer et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Biogeography of bacterial communities exposed to progressive long-term environmental change

(2012) Ramiro Logares et al.   ISME Journal

Microbial diversity in arctic freshwaters is structured by inoculation of microbes from soils

(2012) Byron C Crump et al.   ISME Journal

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Spatial and temporal scales of aquatic bacterial beta diversity

(2012) Stuart E. Jones et al.   Frontiers in Microbiology

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

(2011) B. J. Haas et al.   GENOME RESEARCH

Species sorting and neutral processes are both important during the initial assembly of bacterial communities

(2011) Silke Langenheder et al.   ISME Journal

Defining seasonal marine microbial community dynamics

(2011) Jack A Gilbert et al.   ISME Journal

Contrasting the influences of stream inputs and landscape position on bacterioplankton community structure and dissolved organic matter composition in high-elevation lake chains

(2011) Craig E. Nelson et al.   LIMNOLOGY AND OCEANOGRAPHY

Dissolved Organic Carbon as Major Environmental Factor Affecting Bacterioplankton Communities in Mountain Lakes of Eastern Japan

(2011) Masanori Fujii et al.   MICROBIAL ECOLOGY

A Guide to the Natural History of Freshwater Lake Bacteria

(2011) R. J. Newton et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Local and regional factors influencing bacterial community assembly

(2011) Eva S. Lindström et al.   Environmental Microbiology Reports

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Species sorting affects bacterioplankton community composition as determined by 16S rDNA and 16S rRNA fingerprints

(2010) Jürg B Logue et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY