Evolutionary history constrains microbial traits across environmental variation

Taxonomic patterns in the nitrogen assimilation of soil prokaryotes

(2018) Ember M. Morrissey et al.   ENVIRONMENTAL MICROBIOLOGY

Are microbiome studies ready for hypothesis-driven research?

(2018) Anupriya Tripathi et al.   CURRENT OPINION IN MICROBIOLOGY

Bacterial carbon use plasticity, phylogenetic diversity and the priming of soil organic matter

(2017) Ember M Morrissey et al.   ISME Journal

Experimental evolution and the dynamics of adaptation and genome evolution in microbial populations

(2017) Richard E Lenski   ISME Journal

Phylogenetic organization of bacterial activity

(2016) Ember M Morrissey et al.   ISME Journal

Phylogenomic networks reveal limited phylogenetic range of lateral gene transfer by transduction

(2016) Ovidiu Popa et al.   ISME Journal

Interspecific and Intraspecific Variation in Functional Traits of Subtropical Evergreen and Deciduous Broadleaved Mixed Forests in Karst Topography, Guilin, Southwest China

(2016) Yong Jiang et al.   Tropical Conservation Science

Examining variation in the leaf mass per area of dominant species across two contrasting tropical gradients in light of community assembly

(2016) Margot Neyret et al.   Ecology and Evolution

Quantitative Microbial Ecology through Stable Isotope Probing

(2015) Bruce A. Hungate et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Inclusion of ecologically based trait variation in plant functional types reduces the projected land carbon sink in an earth system model

(2015) Lieneke M. Verheijen et al.   GLOBAL CHANGE BIOLOGY

Functional trait variation along environmental gradients in temperate and Mediterranean trees

(2015) Albert Vilà-Cabrera et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Predicting microbial traits with phylogenies

(2015) Marta Goberna et al.   ISME Journal

Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe

(2015) Jonathan W. Leff et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbiomes in light of traits: A phylogenetic perspective

(2015) J. B. H. Martiny et al.   SCIENCE

Microbial hotspots and hot moments in soil: Concept & review

(2015) Yakov Kuzyakov et al.   SOIL BIOLOGY & BIOCHEMISTRY

Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences

(2014) Pablo Yarza et al.   NATURE REVIEWS MICROBIOLOGY

Trait-based approaches for understanding microbial biodiversity and ecosystem functioning

(2014) Sascha Krause et al.   Frontiers in Microbiology

Phylogenetic conservatism of functional traits in microorganisms

(2012) Adam C Martiny et al.   ISME Journal

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

Barcoded Primers Used in Multiplex Amplicon Pyrosequencing Bias Amplification

(2011) David Berry et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

How do traits vary across ecological scales? A case for trait-based ecology

(2010) Julie Messier et al.   ECOLOGY LETTERS

Response of Terrestrial CH4 Uptake to Interactive Changes in Precipitation and Temperature Along a Climatic Gradient

(2010) Joseph C. Blankinship et al.   ECOSYSTEMS

A multi-trait approach reveals the structure and the relative importance of intra- vs. interspecific variability in plant traits

(2010) Cécile Hélène Albert et al.   FUNCTIONAL ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

The ecological coherence of high bacterial taxonomic ranks

(2010) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Community assembly and shifts in plant trait distributions across an environmental gradient in coastal California

(2009) William K. Cornwell et al.   ECOLOGICAL MONOGRAPHS

Carbon flow in the rhizosphere: carbon trading at the soil–root interface

(2009) D. L. Jones et al.   PLANT AND SOIL

Exploring Predictions of Abundance from Body Mass Using Hierarchical Comparative Approaches

(2008) Brian J. McGill   AMERICAN NATURALIST

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial Biogeography: From Taxonomy to Traits

(2008) J. L. Green et al.   SCIENCE