Metagenomic characterization of bacterial community and antibiotic resistance genes in representative ready-to-eat food in southern China
出版年份 2020 全文链接
标题
Metagenomic characterization of bacterial community and antibiotic resistance genes in representative ready-to-eat food in southern China
作者
关键词
-
出版物
Scientific Reports
Volume 10, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2020-10-23
DOI
10.1038/s41598-020-72620-4
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Prevalence and Characterization of Antimicrobial Resistance in Salmonella enterica Isolates from Retail Foods in Shanghai, China
- (2019) Jingxian Yang et al. Foodborne Pathogens and Disease
- Chicken Meat-Associated Enterococci: Influence of Agricultural Antibiotic Use and Connection to the Clinic
- (2019) Abigail L. Manson et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Characterization of antimicrobial resistance genes and class 1 integrase gene in raw meat and aquatic product, fresh vegetable and fruit, and swine manure in southern China
- (2019) Lina Xiong et al. FOOD CONTROL
- Prevalence of fluoroquinolone, macrolide and sulfonamide-related resistance genes in landfills from East China, mainly driven by MGEs
- (2019) Lihua Yao et al. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY
- Antibiotic resistance and microbiota in the gut of Chinese four major freshwater carp from retail markets
- (2019) Li Yuan et al. ENVIRONMENTAL POLLUTION
- Dissemination and Comparison of Genetic Determinants of mcr-Mediated Colistin Resistance in Enterobacteriaceae via Retailed Raw Meat Products
- (2019) Tereza Gelbíčová et al. Frontiers in Microbiology
- Comparison between digital PCR and real-time PCR in detection of Salmonella typhimurium in milk
- (2018) Meng Wang et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- Safety of ready-to-eat chicken in Burkina Faso: Microbiological quality, antibiotic resistance, and virulence genes in Escherichia coli isolated from chicken samples of Ouagadougou
- (2018) Namwin S. Somda et al. Food Science & Nutrition
- Enterococci from ready-to-eat food - horizontal gene transfer of antibiotic resistance genes and genotypic characterization by PCR Melting Profile
- (2018) Wioleta Chajęcka-Wierzchowska et al. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE
- Antibiotic resistance in foodborne bacteria
- (2018) Manuela Caniça et al. TRENDS IN FOOD SCIENCE & TECHNOLOGY
- Phenotypic and genotypic characterization of antimicrobial resistant Escherichia coli isolated from ready-to-eat food in Singapore using disk diffusion, broth microdilution and whole genome sequencing methods
- (2018) Siyao Guo et al. FOOD CONTROL
- Horizontal gene transfer and shifts in linked bacterial community composition are associated with maintenance of antibiotic resistance genes during food waste composting
- (2018) Hanpeng Liao et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Fishmeal Application Induces Antibiotic Resistance Gene Propagation in Mariculture Sediment
- (2017) Ying Han et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Lettuce and fruits as a source of multidrug resistant Acinetobacter spp.
- (2017) Ana Carvalheira et al. FOOD MICROBIOLOGY
- Antibiotic tolerance facilitates the evolution of resistance
- (2017) Irit Levin-Reisman et al. SCIENCE
- The agri-food chain and antimicrobial resistance: A review
- (2017) John A. Hudson et al. TRENDS IN FOOD SCIENCE & TECHNOLOGY
- A Review on the Applications of Next Generation Sequencing Technologies as Applied to Food-Related Microbiome Studies
- (2017) Yu Cao et al. Frontiers in Microbiology
- Catalogue of antibiotic resistome and host-tracking in drinking water deciphered by a large scale survey
- (2017) Liping Ma et al. Microbiome
- Antibiotic resistance in the food supply chain: where can sequencing and metagenomics aid risk assessment?
- (2017) Johan Bengtsson-Palme Current Opinion in Food Science
- Long-term field application of sewage sludge increases the abundance of antibiotic resistance genes in soil
- (2016) Qinglin Chen et al. ENVIRONMENT INTERNATIONAL
- Metagenomic Analysis Revealing Antibiotic Resistance Genes (ARGs) and Their Genetic Compartments in the Tibetan Environment
- (2016) Baowei Chen et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Prevalence, genetic diversity, and antibiotic resistance of enterotoxigenic Escherichia coli in retail ready-to-eat foods in China
- (2016) Shuhong Zhang et al. FOOD CONTROL
- Antibiotic resistance genes and human bacterial pathogens: Co-occurrence, removal, and enrichment in municipal sewage sludge digesters
- (2016) Feng Ju et al. WATER RESEARCH
- Antibiotic Resistance in the Food Chain: A Developing Country-Perspective
- (2016) Luria Leslie Founou et al. Frontiers in Microbiology
- The transfer of antibiotic resistance from food to humans: facts, implications and future directions
- (2016) H. WANG et al. REVUE SCIENTIFIQUE ET TECHNIQUE-OFFICE INTERNATIONAL DES EPIZOOTIES
- Microbiological survey of raw and ready-to-eat leafy green vegetables marketed in Italy
- (2015) M.N. Losio et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- Metagenomic and network analysis reveal wide distribution and co-occurrence of environmental antibiotic resistance genes
- (2015) Bing Li et al. ISME Journal
- Cheese Rind Communities Provide Tractable Systems for In Situ and In Vitro Studies of Microbial Diversity
- (2014) Benjamin E. Wolfe et al. CELL
- Prevalence of Antibiotic Resistance Genes and Bacterial Pathogens in Long-Term Manured Greenhouse Soils As Revealed by Metagenomic Survey
- (2014) Hua Fang et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Alterations of the human gut microbiome in liver cirrhosis
- (2014) Nan Qin et al. NATURE
- Biogeography and individuality shape function in the human skin metagenome
- (2014) Julia Oh et al. NATURE
- Bacterial phylogeny structures soil resistomes across habitats
- (2014) Kevin J. Forsberg et al. NATURE
- Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes
- (2014) H Bjørn Nielsen et al. NATURE BIOTECHNOLOGY
- Prevalence and detection of antibiotic-resistant determinant in Salmonella isolated from food-producing animals
- (2014) Isoken Henrietta Igbinosa TROPICAL ANIMAL HEALTH AND PRODUCTION
- The Comprehensive Antibiotic Resistance Database
- (2013) Andrew G. McArthur et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Culture dependent and independent analysis of bacterial communities associated with commercial salad leaf vegetables
- (2013) Colin R Jackson et al. BMC MICROBIOLOGY
- Prevalence of Listeria monocytogenes in food, detected by PCR
- (2013) Gheorghe Stetca et al. CURRENT OPINION IN BIOTECHNOLOGY
- Exploring Variation of Antibiotic Resistance Genes in Activated Sludge over a Four-Year Period through a Metagenomic Approach
- (2013) Ying Yang et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Microbiological quality of ready-to-eat salads: An underestimated vehicle of bacteria and clinically relevant antibiotic resistance genes
- (2013) Joana Campos et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- Gut metagenome in European women with normal, impaired and diabetic glucose control
- (2013) Fredrik H. Karlsson et al. NATURE
- Antimicrobial Resistance in the Food Chain: A Review
- (2013) Claire Verraes et al. International Journal of Environmental Research and Public Health
- Food and human gut as reservoirs of transferable antibiotic resistance encoding genes
- (2013) Jean-Marc Rolain Frontiers in Microbiology
- Monitoring of the microbial communities involved in the soy sauce manufacturing process by PCR-denaturing gradient gel electrophoresis
- (2012) Yasushi Tanaka et al. FOOD MICROBIOLOGY
- Occurrence and characteristics of methicillin-resistant and -susceptible Staphylococcus aureus and methicillin-resistant coagulase-negative staphylococci from Japanese retail ready-to-eat raw fish
- (2012) Ahmed M. Hammad et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- Metagenomic microbial community profiling using unique clade-specific marker genes
- (2012) Nicola Segata et al. NATURE METHODS
- Assessment of Metagenomic Assembly Using Simulated Next Generation Sequencing Data
- (2012) Daniel R. Mende et al. PLoS One
- Exposure of Soil Microbial Communities to Chromium and Arsenic Alters Their Diversity and Structure
- (2012) Cody S. Sheik et al. PLoS One
- Symptomatic atherosclerosis is associated with an altered gut metagenome
- (2012) Fredrik H. Karlsson et al. Nature Communications
- Foodborne Pathogens Recovered from Ready-to-Eat Foods from Roadside Cafeterias and Retail Outlets in Alice, Eastern Cape Province, South Africa: Public Health Implications
- (2012) Mirriam E. Nyenje et al. International Journal of Environmental Research and Public Health
- SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
- (2012) Ruibang Luo et al. GigaScience
- Metagenomic Analysis of Kimchi, a Traditional Korean Fermented Food
- (2011) Ji Young Jung et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Plasmid Metagenome Reveals High Levels of Antibiotic Resistance Genes and Mobile Genetic Elements in Activated Sludge
- (2011) Tong Zhang et al. PLoS One
- Call of the wild: antibiotic resistance genes in natural environments
- (2010) Heather K. Allen et al. NATURE REVIEWS MICROBIOLOGY
- Ab initio gene identification in metagenomic sequences
- (2010) Wenhan Zhu et al. NUCLEIC ACIDS RESEARCH
- Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions
- (2010) Marcus J. Claesson et al. NUCLEIC ACIDS RESEARCH
- Evaluation of viral extraction methods on a broad range of Ready-To-Eat foods with conventional and real-time RT-PCR for Norovirus GII detection
- (2008) Leen Baert et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- Fast unfolding of communities in large networks
- (2008) Vincent D Blondel et al. JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT
- Antibiotics and Antibiotic Resistance Genes in Natural Environments
- (2008) J. L. Martinez SCIENCE
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now