标题
Metagenomic microbial community profiling using unique clade-specific marker genes
作者
关键词
-
出版物
NATURE METHODS
Volume 9, Issue 8, Pages 811-814
出版商
Springer Nature
发表日期
2012-06-11
DOI
10.1038/nmeth.2066
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A robust and accurate binning algorithm for metagenomic sequences with arbitrary species abundance ratio
- (2011) H. C. M. Leung et al. BIOINFORMATICS
- Aligning short reads to reference alignments and trees
- (2011) Simon A. Berger et al. BIOINFORMATICS
- Classifying short genomic fragments from novel lineages using composition and homology
- (2011) Donovan H Parks et al. BMC BIOINFORMATICS
- RAIphy: Phylogenetic classification of metagenomics samples using iterative refinement of relative abundance index profiles
- (2011) Ozkan U Nalbantoglu et al. BMC BIOINFORMATICS
- Microbial metatranscriptomics in a permanent marine oxygen minimum zone
- (2011) Frank J. Stewart et al. ENVIRONMENTAL MICROBIOLOGY
- Integrative analysis of environmental sequences using MEGAN4
- (2011) D. H. Huson et al. GENOME RESEARCH
- Enterotypes of the human gut microbiome
- (2011) Manimozhiyan Arumugam et al. NATURE
- Taxonomic metagenome sequence assignment with structured output models
- (2011) Kaustubh R Patil et al. NATURE METHODS
- PhymmBL expanded: confidence scores, custom databases, parallelization and more
- (2011) Arthur Brady et al. NATURE METHODS
- Taxonomic classification of metagenomic shotgun sequences with CARMA3
- (2011) Wolfgang Gerlach et al. NUCLEIC ACIDS RESEARCH
- Toward an Efficient Method of Identifying Core Genes for Evolutionary and Functional Microbial Phylogenies
- (2011) Nicola Segata et al. PLoS One
- MTR: taxonomic annotation of short metagenomic reads using clustering at multiple taxonomic ranks
- (2010) Fabio Gori et al. BIOINFORMATICS
- NBC: the Naive Bayes Classification tool webserver for taxonomic classification of metagenomic reads
- (2010) G. L. Rosen et al. BIOINFORMATICS
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Genomic comparisons of Brucella spp. and closely related bacteria using base compositional and proteome based methods
- (2010) Jon Bohlin et al. BMC EVOLUTIONARY BIOLOGY
- A human gut microbial gene catalogue established by metagenomic sequencing
- (2010) Junjie Qin et al. NATURE
- Bifidobacterium animalis subsp. lactis fermented milk product reduces inflammation by altering a niche for colitogenic microbes
- (2010) P. Veiga et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Vaginal microbiome of reproductive-age women
- (2010) J. Ravel et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models
- (2009) Arthur Brady et al. NATURE METHODS
- The integrated microbial genomes system: an expanding comparative analysis resource
- (2009) Victor M. Markowitz et al. NUCLEIC ACIDS RESEARCH
- KEGG for representation and analysis of molecular networks involving diseases and drugs
- (2009) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- Mapping short DNA sequencing reads and calling variants using mapping quality scores
- (2008) H. Li et al. GENOME RESEARCH
- A core gut microbiome in obese and lean twins
- (2008) Peter J. Turnbaugh et al. NATURE
- NCBI Reference Sequences: current status, policy and new initiatives
- (2008) K. D. Pruitt et al. NUCLEIC ACIDS RESEARCH
- The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
- (2008) J. R. Cole et al. NUCLEIC ACIDS RESEARCH
- A simple, fast, and accurate method of phylogenomic inference
- (2008) Martin Wu et al. GENOME BIOLOGY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now