标题
Finding the generalized molecular principles of protein thermal stability
作者
关键词
-
出版物
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
Volume -, Issue -, Pages -
出版商
Wiley
发表日期
2019-12-24
DOI
10.1002/prot.25866
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Principles of Protein Stability and Their Application in Computational Design
- (2018) Adi Goldenzweig et al. Annual Review of Biochemistry
- Structural flexibility and protein adaptation to temperature: Molecular dynamics analysis of malate dehydrogenases of marine molluscs
- (2018) Yun-wei Dong et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Topology and Oligomerization of Mono- and Oligomeric Proteins Regulate Their Half-Lives in the Cell
- (2018) Saurav Mallik et al. STRUCTURE
- UniProt: a worldwide hub of protein knowledge
- (2018) NUCLEIC ACIDS RESEARCH
- Entropic contribution to enhanced thermal stability in the thermostable P450 CYP119
- (2018) Zhuo Liu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Deamidation post-translational modification in naturally generated peptides in Spanish dry-cured ham
- (2017) Manuel Cañete et al. FOOD CHEMISTRY
- All-Atom Simulations Reveal Protein Charge Decoration in the Folded and Unfolded Ensemble Is Key in Thermophilic Adaptation
- (2017) Lucas Sawle et al. Journal of Chemical Theory and Computation
- Principles for computational design of binding antibodies
- (2017) Dror Baran et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Engineered Bispecific Antibodies with Exquisite HIV-1-Neutralizing Activity
- (2016) Yaoxing Huang et al. CELL
- Water Determines the Structure and Dynamics of Proteins
- (2016) Marie-Claire Bellissent-Funel et al. CHEMICAL REVIEWS
- Contribution of main chain and side chain atoms and their locations to the stability of thermophilic proteins
- (2016) Dharma Rao Tompa et al. JOURNAL OF MOLECULAR GRAPHICS & MODELLING
- Differential Effects of Hydrophobic Core Packing Residues for Thermodynamic and Mechanical Stability of a Hyperthermophilic Protein
- (2016) Katarzyna M. Tych et al. LANGMUIR
- Diverse activation pathways in class A GPCRs converge near the G-protein-coupling region
- (2016) A. J. Venkatakrishnan et al. NATURE
- A Review: Origins of the Dielectric Properties of Proteins and Potential Development as Bio-Sensors
- (2016) Fabien Bibi et al. SENSORS
- Comparing Residue Clusters from Thermophilic and Mesophilic Enzymes Reveals Adaptive Mechanisms
- (2016) Deanne W. Sammond et al. PLoS One
- Rational Design of Disulfide Bonds Increases Thermostability of a Mesophilic 1,3-1,4-β-Glucanase from Bacillus terquilensis
- (2016) Chengtuo Niu et al. PLoS One
- Trading off stability against activity in extremophilic aldolases
- (2016) Markus Dick et al. Scientific Reports
- Engineering de novo disulfide bond in bacterial α-type carbonic anhydrase for thermostable carbon sequestration
- (2016) Byung Hoon Jo et al. Scientific Reports
- Probing the role of cation-π interaction in the thermotolerance and catalytic performance of endo-polygalacturonases
- (2016) Tao Tu et al. Scientific Reports
- Multiple disulfide bridges modulate conformational stability and flexibility in hyperthermophilic archaeal purine nucleoside phosphorylase
- (2015) Maria Libera Bagarolo et al. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS
- Structural and catalytic effects of proline substitution and surface loop deletion in the extended active site of human carbonic anhydrase II
- (2015) Christopher D. Boone et al. FEBS Journal
- Rigidity versus flexibility: the dilemma of understanding protein thermal stability
- (2015) Andrey Karshikoff et al. FEBS Journal
- A theoretical method to compute sequence dependent configurational properties in charged polymers and proteins
- (2015) Lucas Sawle et al. JOURNAL OF CHEMICAL PHYSICS
- Structural features determining thermal adaptation of esterases
- (2015) Filip Kovacic et al. PROTEIN ENGINEERING DESIGN & SELECTION
- Implications of aromatic-aromatic interactions: From protein structures to peptide models
- (2015) Kamlesh Madhusudan Makwana et al. PROTEIN SCIENCE
- Shortening a loop can increase protein native state entropy
- (2015) Yulian Gavrilov et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- The Hydrophobic Temperature Dependence of Amino Acids Directly Calculated from Protein Structures
- (2015) Erik van Dijk et al. PLoS Computational Biology
- Thermal Adaptation of Dihydrofolate Reductase from the Moderate Thermophile Geobacillus stearothermophilus
- (2014) Jiannan Guo et al. BIOCHEMISTRY
- The fundamental tradeoff in genomes and proteomes of prokaryotes established by the genetic code, codon entropy, and physics of nucleic acids and proteins
- (2014) Alexander Goncearenco et al. Biology Direct
- Classification of Intrinsically Disordered Regions and Proteins
- (2014) Robin van der Lee et al. CHEMICAL REVIEWS
- The thermal limits to life on Earth
- (2014) Andrew Clarke International Journal of Astrobiology
- Molecular interactions within the halophilic, thermophilic, and mesophilic prokaryotic ribosomal complexes: clues to environmental adaptation
- (2014) Saurav Mallik et al. JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
- Massive Expansion of Ubiquitination-Related Gene Families within the Chlamydiae
- (2014) Daryl Domman et al. MOLECULAR BIOLOGY AND EVOLUTION
- Ancestral duplications and highly dynamic opsin gene evolution in percomorph fishes
- (2014) Fabio Cortesi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The nature of protein folding pathways
- (2014) S. Walter Englander et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Comparison of Protein-water Interactions in Psychrophilic, Mesophilic, and Thermophilic Fe-SOD
- (2014) Zhaolin Mou et al. PROTEIN AND PEPTIDE LETTERS
- On the Dielectric “Constant” of Proteins: Smooth Dielectric Function for Macromolecular Modeling and Its Implementation in DelPhi
- (2013) Lin Li et al. Journal of Chemical Theory and Computation
- Molecular mechanisms of adaptation emerging from the physics and evolution of nucleic acids and proteins
- (2013) A. Goncearenco et al. NUCLEIC ACIDS RESEARCH
- Pfam: the protein families database
- (2013) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- A Comparison of Structural and Evolutionary Attributes of Escherichia coli and Thermus thermophilus Small Ribosomal Subunits: Signatures of Thermal Adaptation
- (2013) Saurav Mallik et al. PLoS One
- Stabilization of a protein conferred by an increase in folded state entropy
- (2013) S. Dagan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The stability ofTaqDNA polymerase results from a reduced entropic folding penalty; identification of other thermophilic proteins with similar folding thermodynamics
- (2013) Chin-Chi Liu et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Hydrophobic environment is a key factor for the stability of thermophilic proteins
- (2013) M. Michael Gromiha et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Folding the proteome
- (2013) Esther Braselmann et al. TRENDS IN BIOCHEMICAL SCIENCES
- Disease-Associated Mutations Disrupt Functionally Important Regions of Intrinsic Protein Disorder
- (2012) Vladimir Vacic et al. PLoS Computational Biology
- Purification and Characterization of Novel α-Amylase from Bacillus subtilis KIBGE HAS
- (2011) Saeeda Bano et al. AAPS PHARMSCITECH
- How Do Thermophilic Proteins and Proteomes Withstand High Temperature?
- (2011) Lucas Sawle et al. BIOPHYSICAL JOURNAL
- Thermophilic proteins: insight and perspective from in silico experiments
- (2011) Fabio Sterpone et al. CHEMICAL SOCIETY REVIEWS
- Compositional and Structural Features Related to Thermal Stability in the Archaea SRP19 and SRP54 Signal Recognition Particle Proteins
- (2011) Francisco Miralles JOURNAL OF MOLECULAR EVOLUTION
- Stabilizing Salt-Bridge Enhances Protein Thermostability by Reducing the Heat Capacity Change of Unfolding
- (2011) Chi-Ho Chan et al. PLoS One
- Thermo- and Mesostabilizing Protein Interactions Identified by Temperature-Dependent Statistical Potentials
- (2010) Benjamin Folch et al. BIOPHYSICAL JOURNAL
- A novel scoring function for discriminating hyperthermophilic and mesophilic proteins with application to predicting relative thermostability of protein mutants
- (2010) Yunqi Li et al. BMC BIOINFORMATICS
- Water around thermophilic proteins: the role of charged and apolar atoms
- (2010) Fabio Sterpone et al. JOURNAL OF PHYSICS-CONDENSED MATTER
- A series of PDB related databases for everyday needs
- (2010) R. P. Joosten et al. NUCLEIC ACIDS RESEARCH
- Reduction in Structural Disorder and Functional Complexity in the Thermal Adaptation of Prokaryotes
- (2010) Prasad V. Burra et al. PLoS One
- Mechanisms of protein oligomerization, the critical role of insertions and deletions in maintaining different oligomeric states
- (2010) K. Hashimoto et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Removal of surface charge-charge interactions from ubiquitin leaves the protein folded and very stable
- (2010) Vakhtang V. Loladze et al. PROTEIN SCIENCE
- Thermophilic Adaptation of Protein Complexes Inferred from Proteomic Homology Modeling
- (2010) Bin-Guang Ma et al. STRUCTURE
- Discrimination of thermophilic and mesophilic proteins
- (2010) Todd J Taylor et al. BMC STRUCTURAL BIOLOGY
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
- Stability effects of mutations and protein evolvability
- (2009) Nobuhiko Tokuriki et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Engineering thermal stability of l-asparaginase by in vitro directed evolution
- (2009) Georgia A. Kotzia et al. FEBS Journal
- Exploring protein fitness landscapes by directed evolution
- (2009) Philip A. Romero et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- The effect of additional disulfide bonds on the stability and folding of ribonuclease A
- (2008) Pascal Pecher et al. BIOPHYSICAL CHEMISTRY
- Amino acid contacts in proteins adapted to different temperatures: hydrophobic interactions and surface charges play a key role
- (2008) Gisle Sælensminde et al. EXTREMOPHILES
- Salt Bridges in the Hyperthermophilic Protein Ssh10b Are Resilient to Temperature Increases
- (2008) Meng Ge et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Key Role of Proximal Water in Regulating Thermostable Proteins
- (2008) Fabio Sterpone et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Voronoia: analyzing packing in protein structures
- (2008) K. Rother et al. NUCLEIC ACIDS RESEARCH
- Thermostability of Salt Bridges versus Hydrophobic Interactions in Proteins Probed by Statistical Potentials
- (2007) Benjamin Folch et al. Journal of Chemical Information and Modeling
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