标题
PRDM9, a driver of the genetic map
作者
关键词
Sequence motif analysis, Homologous recombination, Alleles, DNA-binding proteins, Mammalian genomics, Protein domains, Chromatin, DNA recombination
出版物
PLoS Genetics
Volume 14, Issue 8, Pages e1007479
出版商
Public Library of Science (PLoS)
发表日期
2018-08-31
DOI
10.1371/journal.pgen.1007479
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- PRDM9 Methyltransferase Activity Is Essential for Meiotic DNA Double-Strand Break Formation at Its Binding Sites
- (2018) Boubou Diagouraga et al. MOLECULAR CELL
- Modulation of Prdm9-controlled meiotic chromosome asynapsis overrides hybrid sterility in mice
- (2018) Sona Gregorova et al. eLife
- Asy2/Mer2: an evolutionarily conserved mediator of meiotic recombination, pairing, and global chromosome compaction
- (2017) Sophie Tessé et al. GENES & DEVELOPMENT
- In vivo binding of PRDM9 reveals interactions with noncanonical genomic sites
- (2017) Corinne Grey et al. GENOME RESEARCH
- PRDM9 interactions with other proteins provide a link between recombination hotspots and the chromosomal axis in meiosis
- (2017) Emil D. Parvanov et al. MOLECULAR BIOLOGY OF THE CELL
- The Red Queen model of recombination hot-spot evolution: a theoretical investigation
- (2017) Thibault Latrille et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- A map of human PRDM9 binding provides evidence for novel behaviors of PRDM9 and other zinc-finger proteins in meiosis
- (2017) Nicolas Altemose et al. eLife
- Repeated losses of PRDM9-directed recombination despite the conservation of PRDM9 across vertebrates
- (2017) Zachary Baker et al. eLife
- Evidence of positive selection and concerted evolution in the rapidly evolvingPRDM9zinc finger domain in goats and sheep
- (2016) S. Ahlawat et al. ANIMAL GENETICS
- Control of Meiotic Crossovers: From Double-Strand Break Formation to Designation
- (2016) Stephen Gray et al. Annual Review of Genetics
- The Landscape of Mouse Meiotic Double-Strand Break Formation, Processing, and Repair
- (2016) Julian Lange et al. CELL
- The evolutionary turnover of recombination hot spots contributes to speciation in mice
- (2016) Fatima Smagulova et al. GENES & DEVELOPMENT
- Structural basis for human PRDM9 action at recombination hot spots
- (2016) Anamika Patel et al. GENES & DEVELOPMENT
- PR Domain-containing Protein 7 (PRDM7) Is a Histone 3 Lysine 4 Trimethyltransferase
- (2016) Levi L. Blazer et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Re-engineering the zinc fingers of PRDM9 reverses hybrid sterility in mice
- (2016) Benjamin Davies et al. NATURE
- Meiotic DNA break formation requires the unsynapsed chromosome axis-binding protein IHO1 (CCDC36) in mice
- (2016) Marcello Stanzione et al. NATURE CELL BIOLOGY
- Evolutionary mysteries in meiosis
- (2016) Thomas Lenormand et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Zinc Finger Domain of the PRDM9 Gene on Chromosome 1 Exhibits High Diversity in Ruminants but Its Paralog PRDM7 Contains Multiple Disruptive Mutations
- (2016) Sonika Ahlawat et al. PLoS One
- A DNA topoisomerase VI-like complex initiates meiotic recombination
- (2016) N. Vrielynck et al. SCIENCE
- The TopoVIB-Like protein family is required for meiotic DNA double-strand break formation
- (2016) T. Robert et al. SCIENCE
- Health and population effects of rare gene knockouts in adult humans with related parents
- (2016) V. M. Narasimhan et al. SCIENCE
- Mechanisms of germ line genome instability
- (2016) Seoyoung Kim et al. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- The Meiotic Recombination Activator PRDM9 Trimethylates Both H3K36 and H3K4 at Recombination Hotspots In Vivo
- (2016) Natalie R. Powers et al. PLoS Genetics
- The pioneering role of PRDM9 indel mutations in tarsier evolution
- (2016) Sacha Heerschop et al. Scientific Reports
- Identification of C2H2-ZF binding preferences from ChIP-seq data using RCADE: Fig. 1.
- (2015) Hamed S. Najafabadi et al. BIOINFORMATICS
- Nuclear localization of PRDM9 and its role in meiotic chromatin modifications and homologous synapsis
- (2015) Fengyun Sun et al. CHROMOSOMA
- MEI4 - a central player in the regulation of meiotic DNA double-strand break formation in the mouse
- (2015) R. Kumar et al. JOURNAL OF CELL SCIENCE
- The Time Scale of Recombination Rate Evolution in Great Apes
- (2015) Laurie S. Stevison et al. MOLECULAR BIOLOGY AND EVOLUTION
- Evolution ofPrdmGenes in Animals: Insights from Comparative Genomics
- (2015) Michel Vervoort et al. MOLECULAR BIOLOGY AND EVOLUTION
- Nonparadoxical evolutionary stability of the recombination initiation landscape in yeast
- (2015) I. Lam et al. SCIENCE
- Stable recombination hotspots in birds
- (2015) S. Singhal et al. SCIENCE
- Affinity-seq detects genome-wide PRDM9 binding sites and reveals the impact of prior chromatin modifications on mammalian recombination hotspot usage
- (2015) Michael Walker et al. Epigenetics & Chromatin
- PRDM9 Drives Evolutionary Erosion of Hotspots in Mus musculus through Haplotype-Specific Initiation of Meiotic Recombination
- (2015) Christopher L. Baker et al. PLoS Genetics
- Multimer Formation Explains Allelic Suppression of PRDM9 Recombination Hotspots
- (2015) Christopher L. Baker et al. PLoS Genetics
- Enhancer Runaway and the Evolution of Diploid Gene Expression
- (2015) Frédéric Fyon et al. PLoS Genetics
- Spotting the enemy within: Targeted silencing of foreign DNA in mammalian genomes by the Krüppel-associated box zinc finger protein family
- (2015) Gernot Wolf et al. Mobile DNA
- DNA double strand break repair pathway choice: a chromatin based decision?
- (2015) T Clouaire et al. Nucleus
- DNA double strand break repair pathway choice: a chromatin based decision?
- (2015) T Clouaire et al. Nucleus
- Self-Organization of Meiotic Recombination Initiation: General Principles and Molecular Pathways
- (2014) Scott Keeney et al. Annual Review of Genetics
- Characterization of the histone methyltransferase PRDM9 using biochemical, biophysical and chemical biology techniques
- (2014) Xiaoying Koh-Stenta et al. BIOCHEMICAL JOURNAL
- Allelic variants ofPRDM9associated with high hyperdiploid childhood acute lymphoblastic leukaemia
- (2014) Eleanor L. Woodward et al. BRITISH JOURNAL OF HAEMATOLOGY
- Prdm9 Polymorphism Unveils Mouse Evolutionary Tracks
- (2014) H. Kono et al. DNA RESEARCH
- PRDM9 binding organizes hotspot nucleosomes and limits Holliday junction migration
- (2014) C. L. Baker et al. GENOME RESEARCH
- Trimethylation of Histone H3 Lysine 36 by Human Methyltransferase PRDM9 Protein
- (2014) Mohammad S. Eram et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- An evolutionary arms race between KRAB zinc-finger genes ZNF91/93 and SVA/L1 retrotransposons
- (2014) Frank M. J. Jacobs et al. NATURE
- Mouse tetrad analysis provides insights into recombination mechanisms and hotspot evolutionary dynamics
- (2014) Francesca Cole et al. NATURE GENETICS
- Transcriptionally active chromatin recruits homologous recombination at DNA double-strand breaks
- (2014) François Aymard et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- An improved predictive recognition model for Cys2-His2 zinc finger proteins
- (2014) Ankit Gupta et al. NUCLEIC ACIDS RESEARCH
- Diversity of Prdm9 Zinc Finger Array in Wild Mice Unravels New Facets of the Evolutionary Turnover of this Coding Minisatellite
- (2014) Jérôme Buard et al. PLoS One
- The B-Subdomain of the Xenopus laevis XFIN KRAB-AB Domain Is Responsible for Its Weaker Transcriptional Repressor Activity Compared to Human ZNF10/Kox1
- (2014) Nadine Born et al. PLoS One
- Genetic recombination variation in wild Robertsonian mice: on the role of chromosomal fusions and Prdm9 allelic background
- (2014) L. Capilla et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Recombination initiation maps of individual human genomes
- (2014) F. Pratto et al. SCIENCE
- Primate evolution of the recombination regulator PRDM9
- (2014) Jerrod J. Schwartz et al. Nature Communications
- SETD2-Dependent Histone H3K36 Trimethylation Is Required for Homologous Recombination Repair and Genome Stability
- (2014) Sophia X. Pfister et al. Cell Reports
- The Red Queen Model of Recombination Hotspots Evolution in the Light of Archaic and Modern Human Genomes
- (2014) Yann Lesecque et al. PLoS Genetics
- Recombination in the Human Pseudoautosomal Region PAR1
- (2014) Anjali G. Hinch et al. PLoS Genetics
- SETD2 is required for DNA double-strand break repair and activation of the p53-mediated checkpoint
- (2014) Sílvia Carvalho et al. eLife
- Initiation of Meiotic Recombination: How and Where? Conservation and Specificities Among Eukaryotes
- (2013) Bernard de Massy Annual Review of Genetics
- A fine-scale recombination map of the human-chimpanzee ancestor reveals faster change in humans than in chimpanzees and a strong impact of GC-biased gene conversion
- (2013) K. Munch et al. GENOME RESEARCH
- Dissecting the Structure and Mechanism of a Complex Duplication-Triplication Rearrangement in theDMDGene
- (2013) Aliya Ishmukhametova et al. HUMAN MUTATION
- Meiotic Recombination Strongly Influences GC-Content Evolution in Short Regions in the Mouse Genome
- (2013) Yves Clément et al. MOLECULAR BIOLOGY AND EVOLUTION
- De novo prediction of DNA-binding specificities for Cys2His2 zinc finger proteins
- (2013) Anton V. Persikov et al. NUCLEIC ACIDS RESEARCH
- Characterization of Prdm9 in Equids and Sterility in Mules
- (2013) Cynthia C. Steiner et al. PLoS One
- Mechanistic basis of infertility of mouse intersubspecific hybrids
- (2013) T. Bhattacharyya et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Molecular Basis for the Regulation of the H3K4 Methyltransferase Activity of PRDM9
- (2013) Hong Wu et al. Cell Reports
- Genetic Recombination Is Targeted towards Gene Promoter Regions in Dogs
- (2013) Adam Auton et al. PLoS Genetics
- DNA binding specificities of the long zinc-finger recombination protein PRDM9
- (2013) Timothy Billings et al. GENOME BIOLOGY
- The Prdm family: expanding roles in stem cells and development
- (2012) T. Hohenauer et al. DEVELOPMENT
- Rare allelic forms of PRDM9 associated with childhood leukemogenesis
- (2012) J. Hussin et al. GENOME RESEARCH
- Sensitive mapping of recombination hotspots using sequencing-based detection of ssDNA
- (2012) P. P. Khil et al. GENOME RESEARCH
- A major recombination hotspot in the XqYq pseudoautosomal region gives new insight into processing of human gene conversion events
- (2012) Shriparna Sarbajna et al. HUMAN MOLECULAR GENETICS
- Spp1, a Member of the Set1 Complex, Promotes Meiotic DSB Formation in Promoters by Tethering Histone H3K4 Methylation Sites to Chromosome Axes
- (2012) Vérane Sommermeyer et al. MOLECULAR CELL
- Genetic recombination is directed away from functional genomic elements in mice
- (2012) Kevin Brick et al. NATURE
- High Diversity at PRDM9 in Chimpanzees and Bonobos
- (2012) Linn Fenna Groeneveld et al. PLoS One
- Recombination regulator PRDM9 influences the instability of its own coding sequence in humans
- (2012) A. J. Jeffreys et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A Fine-Scale Chimpanzee Genetic Map from Population Sequencing
- (2012) A. Auton et al. SCIENCE
- The COMPASS Subunit Spp1 Links Histone Methylation to Initiation of Meiotic Recombination
- (2012) L. Acquaviva et al. SCIENCE
- Interallelic and Intergenic Incompatibilities of the Prdm9 (Hst1) Gene in Mouse Hybrid Sterility
- (2012) Petr Flachs et al. PLoS Genetics
- PRDM proteins: Important players in differentiation and disease
- (2011) Cathrine K. Fog et al. BIOESSAYS
- Spo11-Accessory Proteins Link Double-Strand Break Sites to the Chromosome Axis in Early Meiotic Recombination
- (2011) Silvia Panizza et al. CELL
- A Hierarchical Combination of Factors Shapes the Genome-wide Topography of Yeast Meiotic Recombination Initiation
- (2011) Jing Pan et al. CELL
- Death of PRDM9 coincides with stabilization of the recombination landscape in the dog genome
- (2011) E. Axelsson et al. GENOME RESEARCH
- Genome-wide analysis reveals novel molecular features of mouse recombination hotspots
- (2011) Fatima Smagulova et al. NATURE
- Prdm9, a Major Determinant of Meiotic Recombination Hotspots, Is Not Functional in Dogs and Their Wild Relatives, Wolves and Coyotes
- (2011) Violeta Muñoz-Fuentes et al. PLoS One
- Variants of the protein PRDM9 differentially regulate a set of human meiotic recombination hotspots highly active in African populations
- (2011) I. L. Berg et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- What are the genomic drivers of the rapid evolution of PRDM9?
- (2011) Chris P. Ponting TRENDS IN GENETICS
- Mouse PRDM9 DNA-Binding Specificity Determines Sites of Histone H3 Lysine 4 Trimethylation for Initiation of Meiotic Recombination
- (2011) Corinne Grey et al. PLOS BIOLOGY
- The Discovery of Zinc Fingers and Their Applications in Gene Regulation and Genome Manipulation
- (2010) Aaron Klug Annual Review of Biochemistry
- Functional conservation of Mei4 for meiotic DNA double-strand break formation from yeasts to mice
- (2010) R. Kumar et al. GENES & DEVELOPMENT
- Fine-scale recombination rate differences between sexes, populations and individuals
- (2010) Augustine Kong et al. NATURE
- PRDM9 variation strongly influences recombination hot-spot activity and meiotic instability in humans
- (2010) Ingrid L Berg et al. NATURE GENETICS
- What drives recombination hotspots to repeat DNA in humans?
- (2010) G. McVean PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Prdm9 Controls Activation of Mammalian Recombination Hotspots
- (2010) E. D. Parvanov et al. SCIENCE
- Drive Against Hotspot Motifs in Primates Implicates the PRDM9 Gene in Meiotic Recombination
- (2010) S. Myers et al. SCIENCE
- PRDM9 Is a Major Determinant of Meiotic Recombination Hotspots in Humans and Mice
- (2010) F. Baudat et al. SCIENCE
- Biased Gene Conversion and the Evolution of Mammalian Genomic Landscapes
- (2009) Laurent Duret et al. Annual Review of Genomics and Human Genetics
- Distinct histone modifications define initiation and repair of meiotic recombination in the mouse
- (2009) Jérôme Buard et al. EMBO JOURNAL
- Single-Nucleotide Polymorphisms of the PRDM9 (MEISETZ) Gene in Patients With Nonobstructive Azoospermia
- (2009) S. Irie et al. JOURNAL OF ANDROLOGY
- Extraordinary Molecular Evolution in the PRDM9 Fertility Gene
- (2009) James H. Thomas et al. PLoS One
- Genome-Wide Control of the Distribution of Meiotic Recombination
- (2009) Corinne Grey et al. PLOS BIOLOGY
- Trans-Regulation of Mouse Meiotic Recombination Hotspots by Rcr1
- (2009) Emil D Parvanov et al. PLOS BIOLOGY
- Accelerated Evolution of the Prdm9 Speciation Gene across Diverse Metazoan Taxa
- (2009) Peter L. Oliver et al. PLoS Genetics
- Adaptive Evolution in Zinc Finger Transcription Factors
- (2009) Ryan O. Emerson et al. PLoS Genetics
- Two single nucleotide polymorphisms in PRDM9 (MEISETZ) gene may be a genetic risk factor for Japanese patients with azoospermia by meiotic arrest
- (2008) Toshinobu Miyamoto et al. JOURNAL OF ASSISTED REPRODUCTION AND GENETICS
- A common sequence motif associated with recombination hot spots and genome instability in humans
- (2008) Simon Myers et al. NATURE GENETICS
- A Mouse Speciation Gene Encodes a Meiotic Histone H3 Methyltransferase
- (2008) O. Mihola et al. SCIENCE
- The Recombinational Anatomy of a Mouse Chromosome
- (2008) Kenneth Paigen et al. PLoS Genetics
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