Genes and Junk in Plant Mitochondria—Repair Mechanisms and Selection

Pentatricopeptide Repeat Proteins in Plants

(2014) Alice Barkan et al.   Annual Review of Plant Biology

Stopped in its tracks: The RNA polymerase molecular motor as a robust sensor of DNA damage

(2014) K. Howan et al.   DNA REPAIR

The plant mitochondrial genome: Dynamics and maintenance

(2013) José M. Gualberto et al.   BIOCHIMIE

The “fossilized” mitochondrial genome of Liriodendron tulipifera: ancestral gene content and order, ancestral editing sites, and extraordinarily low mutation rate

(2013) Aaron O Richardson et al.   BMC BIOLOGY

De novo assembly of the complete organelle genome sequences of azuki bean (Vigna angularis) using next-generation sequencers

(2013) Ken Naito et al.   BREEDING SCIENCE

Female and Male Gamete Mitochondria Are Distinct and Complementary in Transcription, Structure, and Genome Function

(2013) Wilson B.M. de Paula et al.   Genome Biology and Evolution

Plant Mitochondrial Genome Evolution Can Be Explained by DNA Repair Mechanisms

(2013) Alan C. Christensen   Genome Biology and Evolution

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ribonucleotides Misincorporated into DNA Act as Strand-Discrimination Signals in Eukaryotic Mismatch Repair

(2013) Medini Manohar Ghodgaonkar et al.   MOLECULAR CELL

The monomeric GIY-YIG homing endonuclease I-BmoI uses a molecular anchor and a flexible tether to sequentially nick DNA

(2013) Benjamin P. Kleinstiver et al.   NUCLEIC ACIDS RESEARCH

Mammalian Transcription-Coupled Excision Repair

(2013) W. Vermeulen et al.   Cold Spring Harbor Perspectives in Biology

Mitochondrial Genome Sequence of the Legume Vicia faba

(2013) Valentine Negruk   Frontiers in Plant Science

Intraspecific variation in mitochondrial genome sequence, structure, and gene content inSilene vulgaris, an angiosperm with pervasive cytoplasmic male sterility

(2012) Daniel B. Sloan et al.   NEW PHYTOLOGIST

A RAD52-like single-stranded DNA binding protein affects mitochondrial DNA repair by recombination

(2012) Sabina Janicka et al.   PLANT JOURNAL

RecA-Dependent DNA Repair Results in Increased Heteroplasmy of the Arabidopsis Mitochondrial Genome

(2012) M. Miller-Messmer et al.   PLANT PHYSIOLOGY

Capturing the Biofuel Wellhead and Powerhouse: The Chloroplast and Mitochondrial Genomes of the Leguminous Feedstock Tree Pongamia pinnata

(2012) Stephen H. Kazakoff et al.   PLoS One

Rapid Evolution of Enormous, Multichromosomal Genomes in Flowering Plant Mitochondria with Exceptionally High Mutation Rates

(2012) Daniel B. Sloan et al.   PLOS BIOLOGY

Angiosperm phylogeny: 17 genes, 640 taxa

(2011) Douglas E. Soltis et al.   AMERICAN JOURNAL OF BOTANY

Double-strand break repair processes drive evolution of the mitochondrial genome in Arabidopsis

(2011) Jaime I Davila et al.   BMC BIOLOGY

The Mitochondrial Genome of the Legume Vigna radiata and the Analysis of Recombination across Short Mitochondrial Repeats

(2011) Andrew J. Alverson et al.   PLoS One

Break-induced replication: What is it and what is it for?

(2010) Bertrand Llorente et al.   CELL CYCLE

Crystal Structures of DNA-Whirly Complexes and Their Role inArabidopsisOrganelle Genome Repair

(2010) Laurent Cappadocia et al.   PLANT CELL

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Diversity of the Arabidopsis Mitochondrial Genome Occurs via Nuclear-Controlled Recombination Activity

(2009) Maria P. Arrieta-Montiel et al.   GENETICS

Plant mitochondria possess a short-patch base excision DNA repair pathway

(2009) Pierre Boesch et al.   NUCLEIC ACIDS RESEARCH

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)

(2008) Ray Ming et al.   NATURE