Complex Patterns of Gene Fission in the Eukaryotic Folate Biosynthesis Pathway

An Alternative Root for the Eukaryote Tree of Life

(2014) Ding He et al.   CURRENT BIOLOGY

The Mitochondrial Genome and a 60-kb Nuclear DNA Segment fromNaegleria fowleri, the Causative Agent of Primary Amoebic Meningoencephalitis

(2013) Emily K. Herman et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Phylogenomics demonstrates that breviate flagellates are related to opisthokonts and apusomonads

(2013) M. W. Brown et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling

(2013) Michael Clarke et al.   GENOME BIOLOGY

The Revised Classification of Eukaryotes

(2012) Sina M. Adl et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Genome-scale comparative analysis of gene fusions, gene fissions, and the fungal tree of life

(2012) G. Leonard et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

ProtTest 3: fast selection of best-fit models of protein evolution

(2011) Diego Darriba et al.   BIOINFORMATICS

Evolution of Patchily Distributed Proteins Shared between Eukaryotes and Prokaryotes: Dictyostelium as a Case Study

(2011) Jan O. Andersson   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

Rooting the Eukaryotic Tree with Mitochondrial and Bacterial Proteins

(2011) R. Derelle et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogenetic Relationships within the Opisthokonta Based on Phylogenomic Analyses of Conserved Single-Copy Protein Domains

(2011) G. Torruella et al.   MOLECULAR BIOLOGY AND EVOLUTION

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

The Genome of Naegleria gruberi Illuminates Early Eukaryotic Versatility

(2010) Lillian K. Fritz-Laylin et al.   CELL

Horizontal Transfer of a Large and Highly Toxic Secondary Metabolic Gene Cluster between Fungi

(2010) Jason C. Slot et al.   CURRENT BIOLOGY

Multiple GAL pathway gene clusters evolved independently and by different mechanisms in fungi

(2010) J. C. Slot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Kingdoms Protozoa and Chromista and the eozoan root of the eukaryotic tree

(2009) T. Cavalier-Smith   Biology Letters

Evolution: Revisiting the Root of the Eukaryote Tree

(2009) Andrew J. Roger et al.   CURRENT BIOLOGY

Drug target identification, validation, characterisation and exploitation for treatment of Acanthamoeba (species) infections

(2009) Craig W. Roberts et al.   EXPERIMENTAL PARASITOLOGY

6-Pyruvoyltetrahydropterin Synthase Paralogs Replace the Folate Synthesis Enzyme Dihydroneopterin Aldolase in Diverse Bacteria

(2009) A. Pribat et al.   JOURNAL OF BACTERIOLOGY

Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic "supergroups"

(2009) V. Hampl et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA