Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling

Novel Miniature Transposable Elements in Thermophilic Synechococcus Strains and Their Impact on an Environmental Population

(2012) W. C. Nelson et al.   JOURNAL OF BACTERIOLOGY

Nitric Oxide Modulates Bacterial Biofilm Formation through a Multicomponent Cyclic-di-GMP Signaling Network

(2012) Lars Plate et al.   MOLECULAR CELL

Genomic Survey of Premetazoans Shows Deep Conservation of Cytoplasmic Tyrosine Kinases and Multiple Radiations of Receptor Tyrosine Kinases

(2012) H. Suga et al.   Science Signaling

Autophagy in protists

(2011) Michael Duszenko et al.   Autophagy

Dictyostelium discoideum : un modèle pour l’étude de la virulence bactérienne

(2011) Stéphanie Dallaire-Dufresne et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Acanthamoeba-Bacteria: A Model to Study Host Interaction with Human Pathogens

(2011) Gunnar Sandstrom et al.   CURRENT DRUG TARGETS

The human phosphotyrosine signaling network: Evolution and hotspots of hijacking in cancer

(2011) L. Li et al.   GENOME RESEARCH

Highly Dynamic Exon Shuffling in Candidate Pathogen Receptors ... What if Brown Algae Were Capable of Adaptive Immunity?

(2011) A. Zambounis et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Rhizome of Life: The Sympatric Rickettsia felis Paradigm Demonstrates the Random Transfer of DNA Sequences

(2011) V. Merhej et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Sequencing Illustrates the Transcriptional Response of Legionella pneumophila during Infection and Identifies Seventy Novel Small Non-Coding RNAs

(2011) Barbara A. Weissenmayer et al.   PLoS One

The SH2 Domain-Containing Proteins in 21 Species Establish the Provenance and Scope of Phosphotyrosine Signaling in Eukaryotes

(2011) B. A. Liu et al.   Science Signaling

Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum

(2011) Richard Sucgang et al.   GENOME BIOLOGY

Taming of the shrewd: novel eukaryotic genes from RNA viruses

(2010) Eugene V Koonin   BMC BIOLOGY

Phosphotyrosine Signaling: Evolving a New Cellular Communication System

(2010) Wendell A. Lim et al.   CELL

Evolutionary origins of oxygen sensing in animals

(2010) Kalle T Rytkönen et al.   EMBO REPORTS

The hypoxia-inducible transcription factor pathway regulates oxygen sensing in the simplest animal, Trichoplax adhaerens

(2010) Christoph Loenarz et al.   EMBO REPORTS

The origins of eukaryotic-like proteins in Legionella pneumophila

(2010) Mor N. Lurie-Weinberger et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Amoeba/Amoebal Symbiont Genetic Transfers: Lessons from Giant Virus Neighbours

(2010) Vincent Thomas et al.   INTERVIROLOGY

Amoebae as Genitors and Reservoirs of Giant Viruses

(2010) Didier Raoult et al.   INTERVIROLOGY

Identification of an L-Rhamnose Synthetic Pathway in Two Nucleocytoplasmic Large DNA Viruses

(2010) M. Parakkottil Chothi et al.   JOURNAL OF VIROLOGY

Calmodulin-binding transcription activator 1 mediates auxin signaling and responds to stresses in Arabidopsis

(2010) Yael Galon et al.   PLANTA

Regulatory Factor X (RFX)-mediated transcriptional rewiring of ciliary genes in animals

(2010) B. P. Piasecki et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Intermediary Metabolism in Protists: a Sequence-based View of Facultative Anaerobic Metabolism in Evolutionarily Diverse Eukaryotes

(2010) Michael L. Ginger et al.   PROTIST

New Assembly, Reannotation and Analysis of the Entamoeba histolytica Genome Reveal New Genomic Features and Protein Content Information

(2010) Hernan A. Lorenzi et al.   PLoS Neglected Tropical Diseases

Gene Transfer and Diversification of Microbial Eukaryotes

(2009) Jan O. Andersson   Annual Review of Microbiology

Free-living amoebae, a training field for macrophage resistance of mycobacteria

(2009) I.B. Salah et al.   CLINICAL MICROBIOLOGY AND INFECTION

The role of MD-2 in the opsonophagocytosis of Gram-negative bacteria

(2009) Pierre Tissières et al.   CURRENT OPINION IN INFECTIOUS DISEASES

Carbohydrate analysis of Acanthamoeba castellanii

(2009) Ricky Dudley et al.   EXPERIMENTAL PARASITOLOGY

Soil amoebae rapidly change bacterial community composition in the rhizosphere of Arabidopsis thaliana

(2009) Katja Rosenberg et al.   ISME Journal

Phylogenetic Distributions and Histories of Proteins Involved in Anaerobic Pyruvate Metabolism in Eukaryotes

(2009) L. A. Hug et al.   MOLECULAR BIOLOGY AND EVOLUTION

SIMAP—a comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters

(2009) Thomas Rattei et al.   NUCLEIC ACIDS RESEARCH

Transcriptome analysis by strand-specific sequencing of complementary DNA

(2009) Dmitri Parkhomchuk et al.   NUCLEIC ACIDS RESEARCH

Extensive, Recent Intron Gains in Daphnia Populations

(2009) W. Li et al.   SCIENCE

Positive Selection of Tyrosine Loss in Metazoan Evolution

(2009) C. S. H. Tan et al.   SCIENCE

Chlamydiae as Symbionts in Eukaryotes

(2008) Matthias Horn   Annual Review of Microbiology

The function of rhamnose-binding lectin in innate immunity by restricted binding to Gb3

(2008) Yasuharu Watanabe et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

RNA-based viral immunity initiated by the Dicer family of host immune receptors

(2008) Roghiyh Aliyari et al.   IMMUNOLOGICAL REVIEWS

GILT is a critical host factor for Listeria monocytogenes infection

(2008) Reshma Singh et al.   NATURE

Identification of genetic variants using bar-coded multiplexed sequencing

(2008) David W Craig et al.   NATURE METHODS

Horizontal gene transfer in eukaryotic evolution

(2008) Patrick J. Keeling et al.   NATURE REVIEWS GENETICS

Entamoeba histolytica Phagocytosis of Human Erythrocytes Involves PATMK, a Member of the Transmembrane Kinase Family

(2008) Douglas R. Boettner et al.   PLoS Pathogens

Ameobal Pathogen Mimivirus Infects Macrophages through Phagocytosis

(2008) Eric Ghigo et al.   PLoS Pathogens

Annotating genomes with massive-scale RNA sequencing

(2008) France Denoeud et al.   GENOME BIOLOGY