Missing Data and Influential Sites: Choice of Sites for Phylogenetic Analysis Can Be As Important As Taxon Sampling and Model Choice

Impact of Missing Data on Phylogenies Inferred from Empirical Phylogenomic Data Sets

(2012) Béatrice Roure et al.   MOLECULAR BIOLOGY AND EVOLUTION

Highly Incomplete Taxa Can Rescue Phylogenetic Analyses from the Negative Impacts of Limited Taxon Sampling

(2012) John J. Wiens et al.   PLoS One

Missing Data in Phylogenetic Analysis: Reconciling Results from Simulations and Empirical Data

(2011) John J. Wiens et al.   SYSTEMATIC BIOLOGY

phangorn: phylogenetic analysis in R

(2010) Klaus Peter Schliep   BIOINFORMATICS

Automated Removal of Noisy Data in Phylogenomic Analyses

(2010) Vadim V. Goremykin et al.   JOURNAL OF MOLECULAR EVOLUTION

Gain and loss of elongation factor genes in green algae

(2009) Ellen Cocquyt et al.   BMC EVOLUTIONARY BIOLOGY

The Effect of Ambiguous Data on Phylogenetic Estimates Obtained by Maximum Likelihood and Bayesian Inference

(2009) Alan R. Lemmon et al.   SYSTEMATIC BIOLOGY

Influence Function for Robust Phylogenetic Reconstructions

(2008) A. Bar-Hen et al.   MOLECULAR BIOLOGY AND EVOLUTION