Counts and sequences, observations that continue to change our understanding of viruses in nature
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Title
Counts and sequences, observations that continue to change our understanding of viruses in nature
Authors
Keywords
informational proteins, viral ecology, viromics
Journal
JOURNAL OF MICROBIOLOGY
Volume 53, Issue 3, Pages 181-192
Publisher
Springer Nature
Online
2015-03-02
DOI
10.1007/s12275-015-5068-6
References
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- (2013) I. Kang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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