Omics for understanding the tolerant mechanism of Trichoderma asperellum TJ01 to organophosphorus pesticide dichlorvos

Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts

(2018) Irina S. Druzhinina et al.   PLoS Genetics

Omics for understanding synergistic action of validamycin A and Trichoderma asperellum GDFS1009 against maize sheath blight pathogen

(2017) Qiong Wu et al.   Scientific Reports

A Novel Zn2-Cys6 Transcription Factor AtrR Plays a Key Role in an Azole Resistance Mechanism of Aspergillus fumigatus by Co-regulating cyp51A and cdr1B Expressions

(2017) Daisuke Hagiwara et al.   PLoS Pathogens

The Trichoderma atroviride putative transcription factor Blu7 controls light responsiveness and tolerance

(2016) José E. Cetz-Chel et al.   BMC GENOMICS

Metabolomics of papillary thyroid carcinoma tissues: potential biomarkers for diagnosis and promising targets for therapy

(2016) Xingchen Shang et al.   TUMOR BIOLOGY

Spatiotemporal Distribution of Phenolamides and the Genetics of Natural Variation of Hydroxycinnamoyl Spermidine in Rice

(2015) Xuekui Dong et al.   Molecular Plant

KEGG as a reference resource for gene and protein annotation

(2015) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Comparison of pesticide residues in surface water and ground water of agriculture intensive areas

(2014) Summaiya Z Lari et al.   Journal of Environmental Health Science and Engineering

Reflections on univariate and multivariate analysis of metabolomics data

(2013) Edoardo Saccenti et al.   Metabolomics

A Novel Integrated Method for Large-Scale Detection, Identification, and Quantification of Widely Targeted Metabolites: Application in the Study of Rice Metabolomics

(2013) Wei Chen et al.   Molecular Plant

Flavonoids as antioxidants in plants: Location and functional significance

(2012) Giovanni Agati et al.   PLANT SCIENCE

The CRE1 carbon catabolite repressor of the fungus Trichoderma reesei: a master regulator of carbon assimilation

(2011) Thomas Portnoy et al.   BMC GENOMICS

Differential expression in RNA-seq: A matter of depth

(2011) S. Tarazona et al.   GENOME RESEARCH

Procedures for large-scale metabolic profiling of serum and plasma using gas chromatography and liquid chromatography coupled to mass spectrometry

(2011) Warwick B Dunn et al.   Nature Protocols

Conidia immobilization of T-DNA inserted Trichoderma atroviride mutant AMT-28 with dichlorvos degradation ability and exploration of biodegradation mechanism

(2010) Wenliang Sun et al.   BIORESOURCE TECHNOLOGY

Proteomic analysis of Trichoderma atroviride mycelia stressed by organophosphate pesticide dichlorvos

(2010) Jun Tang et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Trichoderma harzianumand its Metabolite 6-Pentyl-alpha-pyrone Suppress Fusaric Acid Produced byFusarium moniliforme

(2009) A. El-Hasan et al.   JOURNAL OF PHYTOPATHOLOGY

Identification of a New Biocontrol Gene inTrichoderma atroviride: The Role of an ABC Transporter Membrane Pump in the Interaction with Different Plant-Pathogenic Fungi

(2009) Michelina Ruocco et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Improved degradation of organophosphate dichlorvos by Trichoderma atroviride transformants generated by restriction enzyme-mediated integration (REMI)

(2008) Jun Tang et al.   BIORESOURCE TECHNOLOGY

Recent Advances and Future Prospects in Peptaibiotics, Hydrophobin, and Mycotoxin Research, and Their Importance for Chemotaxonomy ofTrichoderma andHypocrea

(2008) Thomas Degenkolb et al.   CHEMISTRY & BIODIVERSITY

Transcription factors in fungi

(2008) Ekaterina Shelest   FEMS MICROBIOLOGY LETTERS

Visualization of GC/TOF-MS-Based Metabolomics Data for Identification of Biochemically Interesting Compounds Using OPLS Class Models

(2007) Susanne Wiklund et al.   ANALYTICAL CHEMISTRY