Comprehensive discovery and characterization of small RNAs in Corynebacterium glutamicum ATCC 13032

Bacterial sRNAs: Regulation in stress

(2013) Chee-Hock Hoe et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Transcriptional regulation of the operon encoding stress-responsive ECF sigma factor SigH and its anti-sigma factor RshA, and control of its regulatory network in Corynebacterium glutamicum

(2012) Tobias Busche et al.   BMC GENOMICS

sRNAdb: A small non-coding RNA database for gram-positive bacteria

(2012) Jordan Pischimarov et al.   BMC GENOMICS

Molecular recognition and function of riboswitches

(2012) Alexander Serganov et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Bacterial RNA thermometers: molecular zippers and switches

(2012) Jens Kortmann et al.   NATURE REVIEWS MICROBIOLOGY

Deep sequencing uncovers numerous small RNAs on all four replicons of the plant pathogen Agrobacterium tumefaciens

(2012) Ina Wilms et al.   RNA Biology

Identification of small RNAs in Mycobacterium smegmatis using heterologous Hfq

(2012) S.-K. Li et al.   RNA

Transcriptomic profiling of the oyster pathogen Vibrio splendidus opens a window on the evolutionary dynamics of the small RNA repertoire in the Vibrio genus

(2012) C. Toffano-Nioche et al.   RNA

Corynebacterium glutamicum as a potent biocatalyst for the bioconversion of pentose sugars to value-added products

(2011) Vipin Gopinath et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming

(2011) Jochen Blom et al.   BIOINFORMATICS

Comparative analysis of two complete Corynebacterium ulcerans genomes and detection of candidate virulence factors

(2011) Eva Trost et al.   BMC GENOMICS

Sigma factors and promoters in Corynebacterium glutamicum

(2011) Miroslav Pátek et al.   JOURNAL OF BIOTECHNOLOGY

Regulation by Small RNAs in Bacteria: Expanding Frontiers

(2011) Gisela Storz et al.   MOLECULAR CELL

The intracellular sRNA transcriptome of Listeria monocytogenes during growth in macrophages

(2011) Mobarak A. Mraheil et al.   NUCLEIC ACIDS RESEARCH

CoryneRegNet 6.0--Updated database content, new analysis methods and novel features focusing on community demands

(2011) J. Pauling et al.   NUCLEIC ACIDS RESEARCH

Genome-wide antisense transcription drives mRNA processing in bacteria

(2011) I. Lasa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Deep sequencing-based identification of small non-coding RNAs inStreptomyces coelicolor

(2011) Michael-Paul Vockenhuber et al.   RNA Biology

Sequence-Based Analysis Uncovers an Abundance of Non-Coding RNA in the Total Transcriptome of Mycobacterium tuberculosis

(2011) Kristine B. Arnvig et al.   PLoS Pathogens

Bacterial Antisense RNAs: How Many Are There, and What Are They Doing?

(2010) Maureen Kiley Thomason et al.   Annual Review of Genetics

A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti

(2010) Jan-Philip Schlüter et al.   BMC GENOMICS

PcaO Positively Regulates pcaHG of the  -Ketoadipate Pathway in Corynebacterium glutamicum

(2010) K.-X. Zhao et al.   JOURNAL OF BACTERIOLOGY

An antisense RNA that governs the expression kinetics of a multifunctional virulence gene

(2010) Eun-Jin Lee et al.   MOLECULAR MICROBIOLOGY

The primary transcriptome of the major human pathogen Helicobacter pylori

(2010) Cynthia M. Sharma et al.   NATURE

FragSeq: transcriptome-wide RNA structure probing using high-throughput sequencing

(2010) Jason G Underwood et al.   NATURE METHODS

Multiple small RNAs identified in Mycobacterium bovis BCG are also expressed in Mycobacterium tuberculosis and Mycobacterium smegmatis

(2010) J. M. DiChiara et al.   NUCLEIC ACIDS RESEARCH

Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomes

(2010) Zasha Weinberg et al.   GENOME BIOLOGY

Regulatory RNAs in Bacteria

(2009) Lauren S. Waters et al.   CELL

Experimental approaches for the discovery and characterization of regulatory small RNA

(2009) Cynthia Mira Sharma et al.   CURRENT OPINION IN MICROBIOLOGY

Regulation of Corynebacterium glutamicum Heat Shock Response by the Extracytoplasmic-Function Sigma Factor SigH and Transcriptional Regulators HspR and HrcA

(2009) S. Ehira et al.   JOURNAL OF BACTERIOLOGY

Identification of small RNAs inMycobacterium tuberculosis

(2009) Kristine B. Arnvig et al.   MOLECULAR MICROBIOLOGY

A Genome-Wide Analysis of Small Regulatory RNAs in the Human Pathogen Group A Streptococcus

(2009) Nataly Perez et al.   PLoS One

Biology oftrans-Translation

(2008) Kenneth C. Keiler   Annual Review of Microbiology

Corynebacterium glutamicum Contains 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthases That Display Novel Biochemical Features

(2008) Y.-J. Liu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The dual transcriptional regulator CysR in Corynebacterium glutamicum ATCC 13032 controls a subset of genes of the McbR regulon in response to the availability of sulphide acceptor molecules

(2008) Christian Rückert et al.   BMC GENOMICS

Chromosomally encoded small antisense RNA inCorynebacterium glutamicum

(2008) Martina Zemanová et al.   FEMS MICROBIOLOGY LETTERS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Small non-coding RNAs in Streptomyces coelicolor

(2008) Julia P. Swiercz et al.   NUCLEIC ACIDS RESEARCH