Nannochloropsis plastid and mitochondrial phylogenomes reveal organelle diversification mechanism and intragenus phylotyping strategy in microalgae

Accurate and reliable quantification of total microalgal fuel potential as fatty acid methyl esters by in situ transesterification

(2012) Lieve M. L. Laurens et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

The Complete Chloroplast Genome of Ginkgo biloba Reveals the Mechanism of Inverted Repeat Contraction

(2012) Ching-Ping Lin et al.   Genome Biology and Evolution

Chloroplast-mitochondria cross-talk in diatoms

(2012) J. Prihoda et al.   JOURNAL OF EXPERIMENTAL BOTANY

Alveolate Mitochondrial Metabolic Evolution: Dinoflagellates Force Reassessment of the Role of Parasitism as a Driver of Change in Apicomplexans

(2012) Jillian C. Danne et al.   MOLECULAR BIOLOGY AND EVOLUTION

PredAlgo: A New Subcellular Localization Prediction Tool Dedicated to Green Algae

(2012) Marianne Tardif et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome Sequencing and Mapping Reveal Loss of Heterozygosity as a Mechanism for Rapid Adaptation in the Vegetable Pathogen Phytophthora capsici

(2012) Kurt H. Lamour et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Exploiting diversity and synthetic biology for the production of algal biofuels

(2012) D. Ryan Georgianna et al.   NATURE

DNA Barcoding as an Effective Tool in Improving a Digital Plant Identification System: A Case Study for the Area of Mt. Valerio, Trieste (NE Italy)

(2012) Ilaria Bruni et al.   PLoS One

Genome, Functional Gene Annotation, and Nuclear Transformation of the Heterokont Oleaginous Alga Nannochloropsis oceanica CCMP1779

(2012) Astrid Vieler et al.   PLoS Genetics

Genomic insights from the oleaginous model alga Nannochloropsis gaditana

(2012) Robert E. Jinkerson et al.   Bioengineered

Recent transfer of an iron-regulated gene from the plastid to the nuclear genome in an oceanic diatom adapted to chronic iron limitation

(2011) Markus Lommer et al.   BMC GENOMICS

Determination of the melon chloroplast and mitochondrial genome sequences reveals that the largest reported mitochondrial genome in plants contains a significant amount of DNA having a nuclear origin

(2011) Luis Rodríguez-Moreno et al.   BMC GENOMICS

Loss of Different Inverted Repeat Copies from the Chloroplast Genomes of Pinaceae and Cupressophytes and Influence of Heterotachy on the Evaluation of Gymnosperm Phylogeny

(2011) Chung-Shien Wu et al.   Genome Biology and Evolution

The Chloroplast Genome of the Green Alga Schizomeris leibleinii (Chlorophyceae) Provides Evidence for Bidirectional DNA Replication from a Single Origin in the Chaetophorales

(2011) Jean-Simon Brouard et al.   Genome Biology and Evolution

Decoding algal genomes: tracing back the history of photosynthetic life on Earth

(2011) Leïla Tirichine et al.   PLANT JOURNAL

Choosing and Using a Plant DNA Barcode

(2011) Peter M. Hollingsworth et al.   PLoS One

PPR proteins network as site-specific RNA editing factors in plant organelles

(2011) Anja Zehrmann et al.   RNA Biology

Complete sequence of the mitochondrial genome of a diatom alga Synedra acus and comparative analysis of diatom mitochondrial genomes

(2010) Nikolai V. Ravin et al.   CURRENT GENETICS

Red Algae Lose Key Mitochondrial Genes in Response to Becoming Parasitic

(2010) Lillian Hancock et al.   Genome Biology and Evolution

Nucleus-Independent Control of the Rubisco Operon by the Plastid-Encoded Transcription Factor Ycf30 in the Red Alga Cyanidioschyzon merolae

(2010) A. Minoda et al.   PLANT PHYSIOLOGY

A common red algal origin of the apicomplexan, dinoflagellate, and heterokont plastids

(2010) J. Janouskovec et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plastid genomes of two brown algae, Ectocarpus siliculosus and Fucus vesiculosus: further insights on the evolution of red-algal derived plastids

(2009) Gildas Le Corguillé et al.   BMC EVOLUTIONARY BIOLOGY

The Chloroplast Genomes of the Green Algae Pedinomonas minor, Parachlorella kessleri, and Oocystis solitaria Reveal a Shared Ancestry between the Pedinomonadales and Chlorellales

(2009) M. Turmel et al.   MOLECULAR BIOLOGY AND EVOLUTION

Chloroplast RNA Editing by Pentatricopeptide Repeat Proteins

(2009) J. Mach   PLANT CELL

Fine-scale mergers of chloroplast and mitochondrial genes create functional, transcompartmentally chimeric mitochondrial genes

(2009) W. Hao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Barcoding of Diatoms: Nuclear Encoded ITS Revisited

(2009) Mónica B.J. Moniz et al.   PROTIST

Genomic Footprints of a Cryptic Plastid Endosymbiosis in Diatoms

(2009) A. Moustafa et al.   SCIENCE

GenomeVx: simple web-based creation of editable circular chromosome maps

(2008) G. C. Conant et al.   BIOINFORMATICS

SOAP: short oligonucleotide alignment program

(2008) R. Li et al.   BIOINFORMATICS

Dynamics and evolution of the inverted repeat-large single copy junctions in the chloroplast genomes of monocots

(2008) Rui-Jiang Wang et al.   BMC EVOLUTIONARY BIOLOGY

Chloroplast genome sequencing analysis of Heterosigma akashiwo CCMP452 (West Atlantic) and NIES293 (West Pacific) strains

(2008) Rose Cattolico et al.   BMC GENOMICS

Relative rates of synonymous substitutions in the mitochondrial, chloroplast and nuclear genomes of seed plants

(2008) G DROUIN et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION