Alveolate Mitochondrial Metabolic Evolution: Dinoflagellates Force Reassessment of the Role of Parasitism as a Driver of Change in Apicomplexans

Experimental design and statistical rigor in phylogenomics of horizontal and endosymbiotic gene transfer

(2011) John W Stiller   BMC EVOLUTIONARY BIOLOGY

The Mitochondrial Genome and Transcriptome of the Basal Dinoflagellate Hematodinium sp.: Character Evolution within the Highly Derived Mitochondrial Genomes of Dinoflagellates

(2011) C. J. Jackson et al.   Genome Biology and Evolution

Isotopomer Profiling ofLeishmania mexicanaPromastigotes Reveals Important Roles for Succinate Fermentation and Aspartate Uptake in Tricarboxylic Acid Cycle (TCA) Anaplerosis, Glutamate Synthesis, and Growth

(2011) Eleanor C. Saunders et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Alveolate Phylogeny Inferred using Concatenated Ribosomal Proteins

(2011) TSVETAN R. BACHVAROFF et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Analysis of Dinoflagellate Mitochondrial Protein Sorting Signals Indicates a Highly Stable Protein Targeting System across Eukaryotic Diversity

(2011) Jillian C. Danne et al.   JOURNAL OF MOLECULAR BIOLOGY

Two internal type II NADH dehydrogenases of Toxoplasma gondii are both required for optimal tachyzoite growth

(2011) San San Lin et al.   MOLECULAR MICROBIOLOGY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Tetrapyrrole Synthesis of Photosynthetic Chromerids Is Likely Homologous to the Unusual Pathway of Apicomplexan Parasites

(2011) Luděk Kořený et al.   PLANT CELL

Chloroplast genomes of photosynthetic eukaryotes

(2011) Beverley R. Green   PLANT JOURNAL

Spliced Leader RNAs, Mitochondrial Gene Frameshifts and Multi-Protein Phylogeny Expand Support for the Genus Perkinsus as a Unique Group of Alveolates

(2011) Huan Zhang et al.   PLoS One

An Assessment of Vertical Inheritance versus Endosymbiont Transfer of Nucleus-encoded Genes for Mitochondrial Proteins Following Tertiary Endosymbiosis in Karlodinium micrum

(2011) Jillian C. Danne et al.   PROTIST

Ancient and essential: the assembly of iron–sulfur clusters in plants

(2011) Janneke Balk et al.   TRENDS IN PLANT SCIENCE

Versatility in the acquisition of energy and carbon sources by the Apicomplexa

(2010) Valerie Polonais et al.   BIOLOGY OF THE CELL

Central carbon metabolism of Plasmodium parasites

(2010) Kellen L. Olszewski et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Phylogenomic Evidence for Separate Acquisition of Plastids in Cryptophytes, Haptophytes, and Stramenopiles

(2010) D. Baurain et al.   MOLECULAR BIOLOGY AND EVOLUTION

Branched tricarboxylic acid metabolism in Plasmodium falciparum

(2010) Kellen L. Olszewski et al.   NATURE

Extensive frameshift at all AGG and CCC codons in the mitochondrial cytochrome c oxidase subunit 1 gene of Perkinsus marinus (Alveolata; Dinoflagellata)

(2010) Isao Masuda et al.   NUCLEIC ACIDS RESEARCH

Diversity in mitochondrial metabolic pathways in parasitic protists Plasmodium and Cryptosporidium

(2010) Tatsushi Mogi et al.   PARASITOLOGY INTERNATIONAL

The evolution, metabolism and functions of the apicoplast

(2010) L. Lim et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A common red algal origin of the apicomplexan, dinoflagellate, and heterokont plastids

(2010) J. Janouskovec et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dinoflagellate mitochondrial genomes: stretching the rules of molecular biology

(2009) Ross F. Waller et al.   BIOESSAYS

Identification of mitochondrial Complex II subunits SDH3 and SDH4 and ATP synthase subunits a and b in Plasmodium spp.

(2009) Tatsushi Mogi et al.   MITOCHONDRION

13C-based metabolic flux analysis

(2009) Nicola Zamboni et al.   Nature Protocols

Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic "supergroups"

(2009) V. Hampl et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Localisation of gluconeogenesis and tricarboxylic acid (TCA)-cycle enzymes and first functional analysis of the TCA cycle in Toxoplasma gondii

(2008) Tobias Fleige et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Quantifying Reductive Carboxylation Flux of Glutamine to Lipid in a Brown Adipocyte Cell Line

(2008) Hyuntae Yoo et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Apicomplexan mitochondrial metabolism: a story of gains, losses and retentions

(2008) Frank Seeber et al.   TRENDS IN PARASITOLOGY

Proteomic Profiling of Plasmodium Sporozoite Maturation Identifies New Proteins Essential for Parasite Development and Infectivity

(2008) Edwin Lasonder et al.   PLoS Pathogens

The validity of mitochondrial dehydrogenases as antimalarial drug targets

(2007) Akhil B. Vaidya et al.   TRENDS IN PARASITOLOGY