Genome, Functional Gene Annotation, and Nuclear Transformation of the Heterokont Oleaginous Alga Nannochloropsis oceanica CCMP1779

Effect of UV-A Irradiance on Lipid Accumulation in Nannochloropsis oculata

(2012) Rathy Srinivas et al.   PHOTOCHEMISTRY AND PHOTOBIOLOGY

A Lipid Droplet Protein of Nannochloropsis with Functions Partially Analogous to Plant Oleosins

(2012) A. Vieler et al.   PLANT PHYSIOLOGY

Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropsis gaditana

(2012) Randor Radakovits et al.   Nature Communications

Sulfur Assimilation in Photosynthetic Organisms: Molecular Functions and Regulations of Transporters and Assimilatory Enzymes

(2011) Hideki Takahashi et al.   Annual Review of Plant Biology

Acclimation of Nannochloropsis gaditana to different illumination regimes: Effects on lipids accumulation

(2011) Diana Simionato et al.   BIORESOURCE TECHNOLOGY

Excess CO2 supply inhibits mixotrophic growth of Chlorella protothecoides and Nannochloropsis salina

(2011) Eleonora Sforza et al.   BIORESOURCE TECHNOLOGY

Chlamydomonas reinhardtii as a new model system for studying the molecular basis of the circadian clock

(2011) Takuya Matsuo et al.   FEBS LETTERS

Mechanism of Proton Transfer in [FeFe]-Hydrogenase fromClostridium pasteurianum

(2011) Adam J. Cornish et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Triacylglycerol profiling of marine microalgae by mass spectrometry

(2011) Megan A. Danielewicz et al.   JOURNAL OF LIPID RESEARCH

NUCLEAR MONOPLOIDY AND ASEXUAL PROPAGATION OF NANNOCHLOROPSIS OCEANICA (EUSTIGMATOPHYCEAE) AS REVEALED BY ITS GENOME SEQUENCE1

(2011) Kehou Pan et al.   JOURNAL OF PHYCOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Carbon dioxide concentrating mechanism in Chlamydomonas reinhardtii: inorganic carbon transport and CO2 recapture

(2011) Yingjun Wang et al.   PHOTOSYNTHESIS RESEARCH

Systems Biology Approach inChlamydomonasReveals Connections between Copper Nutrition and Multiple Metabolic Steps

(2011) Madeli Castruita et al.   PLANT CELL

Mechanism of Plastid Division: From a Bacterium to an Organelle

(2011) S.-y. Miyagishima   PLANT PHYSIOLOGY

Gene Gain and Loss during Evolution of Obligate Parasitism in the White Rust Pathogen of Arabidopsis thaliana

(2011) Eric Kemen et al.   PLOS BIOLOGY

Protein Transport into Chloroplasts

(2010) Hsou-min Li et al.   Annual Review of Plant Biology

Photoprotection in the diatom Thalassiosira pseudonana: Role of LI818-like proteins in response to high light stress

(2010) Song-Hua Zhu et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Enhanced algae growth in both phototrophic and mixotrophic culture under blue light

(2010) Probir Das et al.   BIORESOURCE TECHNOLOGY

Chloroplast division: squeezing the photosynthetic captive

(2010) Shin-ya Miyagishima et al.   CURRENT OPINION IN MICROBIOLOGY

Nitrate signaling: adaptation to fluctuating environments

(2010) Gabriel Krouk et al.   CURRENT OPINION IN PLANT BIOLOGY

Isolation of chloroplast FtsZ and AtpC, and analysis of protein targeting into the complex chloroplast of the haptophyte Pavlova pinguis

(2010) Toshikazu Nishikawa et al.   CYTOLOGIA

The Ectocarpus genome and the independent evolution of multicellularity in brown algae

(2010) J. Mark Cock et al.   NATURE

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Clocks not winding down: unravelling circadian networks

(2010) Eric E. Zhang et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The cell wall polysaccharide metabolism of the brown alga Ectocarpus siliculosus. Insights into the evolution of extracellular matrix polysaccharides in Eukaryotes

(2010) Gurvan Michel et al.   NEW PHYTOLOGIST

Central and storage carbon metabolism of the brown alga Ectocarpus siliculosus: insights into the origin and evolution of storage carbohydrates in Eukaryotes

(2010) Gurvan Michel et al.   NEW PHYTOLOGIST

PlantTFDB 2.0: update and improvement of the comprehensive plant transcription factor database

(2010) He Zhang et al.   NUCLEIC ACIDS RESEARCH

Rfam: Wikipedia, clans and the "decimal" release

(2010) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

A Stromal Heat Shock Protein 70 System Functions in Protein Import into Chloroplasts in the Moss Physcomitrella patens

(2010) L.-X. Shi et al.   PLANT CELL

The Significance of Protein Maturation by Plastidic Type I Signal Peptidase 1 for Thylakoid Development in Arabidopsis Chloroplasts

(2010) R. L. Shipman-Roston et al.   PLANT PHYSIOLOGY

Changes in Transcript Abundance in Chlamydomonas reinhardtii following Nitrogen Deprivation Predict Diversion of Metabolism

(2010) R. Miller et al.   PLANT PHYSIOLOGY

Physcomitrella patens mutants affected on heat dissipation clarify the evolution of photoprotection mechanisms upon land colonization

(2010) A. Alboresi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A common red algal origin of the apicomplexan, dinoflagellate, and heterokont plastids

(2010) J. Janouskovec et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

More Membranes, more Proteins: Complex Protein Import Mechanisms into Secondary Plastids

(2010) Swati Agrawal et al.   PROTIST

An Outlook on Microalgal Biofuels

(2010) R. H. Wijffels et al.   SCIENCE

Chloroplasts Divide by Contraction of a Bundle of Nanofilaments Consisting of Polyglucan

(2010) Y. Yoshida et al.   SCIENCE

Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire

(2010) C André Lévesque et al.   GENOME BIOLOGY

Mechanisms of Lipid Transport Involved in Organelle Biogenesis in Plant Cells

(2009) Christoph Benning   Annual Review of Cell and Developmental Biology

Theoretical Maximum Algal Oil Production

(2009) Kristina M. Weyer et al.   BioEnergy Research

Infernal 1.0: inference of RNA alignments

(2009) E. P. Nawrocki et al.   BIOINFORMATICS

Quantitative measures for the management and comparison of annotated genomes

(2009) Karen Eilbeck et al.   BMC BIOINFORMATICS

Chlamydomonas CONSTANS and the Evolution of Plant Photoperiodic Signaling

(2009) Gloria Serrano et al.   CURRENT BIOLOGY

The Bacterial ZapA-like Protein ZED Is Required for Mitochondrial Division

(2009) Yamato Yoshida et al.   CURRENT BIOLOGY

A Novel Dynamin-Related Protein Has Been Recruited for Apicoplast Fission in Toxoplasma gondii

(2009) Giel G. van Dooren et al.   CURRENT BIOLOGY

Diatom PtCPF1 is a new cryptochrome/photolyase family member with DNA repair and transcription regulation activity

(2009) Sacha Coesel et al.   EMBO REPORTS

Characterization of the FtsZ-Interacting Septal Proteins SepF and Ftn6 in the Spherical-Celled Cyanobacterium Synechocystis Strain PCC 6803

(2009) M. Marbouty et al.   JOURNAL OF BACTERIOLOGY

Janus-faced Enzymes Yeast Tgl3p and Tgl5p Catalyze Lipase and Acyltransferase Reactions

(2009) Sona Rajakumari et al.   MOLECULAR BIOLOGY OF THE CELL

An ancient light-harvesting protein is critical for the regulation of algal photosynthesis

(2009) Graham Peers et al.   NATURE

A census of human transcription factors: function, expression and evolution

(2009) Juan M. Vaquerizas et al.   NATURE REVIEWS GENETICS

Diversity and dispersal of a ubiquitous protein family: acyl-CoA dehydrogenases

(2009) Yao-Qing Shen et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Distribution and phylogeny of the blue light receptors aureochromes in eukaryotes

(2009) Mié Ishikawa et al.   PLANTA

An Integrated Analysis of Molecular Acclimation to High Light in the Marine Diatom Phaeodactylum tricornutum

(2009) Marianne Nymark et al.   PLoS One

The versatility of algae and their lipid metabolism

(2008) John L. Harwood et al.   BIOCHIMIE

Microalgae for oil: Strain selection, induction of lipid synthesis and outdoor mass cultivation in a low-cost photobioreactor

(2008) Liliana Rodolfi et al.   BIOTECHNOLOGY AND BIOENGINEERING

HECTAR: A method to predict subcellular targeting in heterokonts

(2008) Bernhard Gschloessl et al.   BMC BIOINFORMATICS

Sulfate assimilation in eukaryotes: fusions, relocations and lateral transfers

(2008) Nicola J Patron et al.   BMC EVOLUTIONARY BIOLOGY

Photobiological hydrogen-producing systems

(2008) Maria Lucia Ghirardi et al.   CHEMICAL SOCIETY REVIEWS

Aquatic phototrophs: efficient alternatives to land-based crops for biofuels

(2008) G Charles Dismukes et al.   CURRENT OPINION IN BIOTECHNOLOGY

Transgenic microalgae as a non-antibiotic bactericide producer to defend against bacterial pathogen infection in the fish digestive tract

(2008) Si-Shen Li et al.   FISH & SHELLFISH IMMUNOLOGY

Green Transcription Factors: A Chlamydomonas Overview

(2008) D. M. Riano-Pachon et al.   GENETICS

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

The Phaeodactylum genome reveals the evolutionary history of diatom genomes

(2008) Chris Bowler et al.   NATURE

Disrupting Two Arabidopsis thaliana Xylosyltransferase Genes Results in Plants Deficient in Xyloglucan, a Major Primary Cell Wall Component

(2008) D. M. Cavalier et al.   PLANT CELL

Unusual Nuclear Division in Nannochloropsis oculata (Eustigmatophyceae, Heterokonta) which May Ensure Faithful Transmission of Secondary Plastids

(2008) Ryohei Murakami et al.   PROTIST