LRpath analysis reveals common pathways dysregulated via DNA methylation across cancer types

Three differentiation states risk-stratify bladder cancer into distinct subtypes

(2012) J.-P. Volkmer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Developmental programming and epigenetics

(2011) Anne Gabory et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Epigenomic Analysis of Aberrantly Methylated Genes in Colorectal Cancer Identifies Genes Commonly Affected by Epigenetic Alterations

(2011) Young-Ho Kim et al.   ANNALS OF SURGICAL ONCOLOGY

DNA methylation in glioblastoma: impact on gene expression and clinical outcome.

(2011) Amandine Etcheverry et al.   BMC GENOMICS

DNA methylation profiling reveals novel biomarkers and important roles for DNA methyltransferases in prostate cancer

(2011) Y. Kobayashi et al.   GENOME RESEARCH

Integrated genomic analyses of ovarian carcinoma

(2011) D. Bell et al.   NATURE

DNA secondary structures and epigenetic determinants of cancer genome evolution

(2011) Subhajyoti De et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

DNA methylation signatures define molecular subtypes of diffuse large B-cell lymphoma

(2010) R. Shaknovich et al.   BLOOD

Aberrant global methylation patterns affect the molecular pathogenesis and prognosis of multiple myeloma

(2010) B. A. Walker et al.   BLOOD

ConceptGen: a gene set enrichment and gene set relation mapping tool

(2009) Maureen A. Sartor et al.   BIOINFORMATICS

Deregulation of 2 Potassium Channels in Pancreas Adenocarcinomas

(2009) Marie Brevet et al.   PANCREAS

Genetics and epigenetics: stability and plasticity during cellular differentiation

(2009) Fabio Mohn et al.   TRENDS IN GENETICS

LRpath: a logistic regression approach for identifying enriched biological groups in gene expression data

(2008) Maureen A. Sartor et al.   BIOINFORMATICS

Epigenetic-Mediated Dysfunction of the Bone Morphogenetic Protein Pathway Inhibits Differentiation of Glioblastoma-Initiating Cells

(2008) Jeongwu Lee et al.   CANCER CELL

DNA Hypomethylation Arises Later in Prostate Cancer Progression than CpG Island Hypermethylation and Contributes to Metastatic Tumor Heterogeneity

(2008) Srinivasan Yegnasubramanian et al.   CANCER RESEARCH

Epigenetic contributions to cancer metastasis

(2008) David I. Rodenhiser   CLINICAL & EXPERIMENTAL METASTASIS

Cancer-related inflammation

(2008) Alberto Mantovani et al.   NATURE