A close-up view on ITS2 evolution and speciation - a case study in the Ulvophyceae (Chlorophyta, Viridiplantae)

Taxonomic reassessment of the genus Mychonastes (Chlorophyceae, Chlorophyta) including the description of eight new species

(2011) L. Krienitz et al.   PHYCOLOGIA

Taxonomy of Desmodesmus serratus (Chlorophyceae, Chlorophyta) and related taxa on the basis of morphological and DNA sequence data

(2011) Marvin W. Fawley et al.   PHYCOLOGIA

Internal Transcribed Spacer 2 (nu ITS2 rRNA) Sequence-Structure Phylogenetics: Towards an Automated Reconstruction of the Green Algal Tree of Life

(2011) Mark A. Buchheim et al.   PLoS One

Including RNA secondary structures improves accuracy and robustness in reconstruction of phylogenetic trees

(2010) Alexander Keller et al.   Biology Direct

RNAstructure: software for RNA secondary structure prediction and analysis

(2010) Jessica S Reuter et al.   BMC BIOINFORMATICS

INVESTIGATIONS INTO SOUTHERN AUSTRALIAN ULVA (ULVOPHYCEAE, CHLOROPHYTA) TAXONOMY AND MOLECULAR PHYLOGENY INDICATE BOTH COSMOPOLITANISM AND ENDEMIC CRYPTIC SPECIES1

(2010) Lesleigh G. K. Kraft et al.   JOURNAL OF PHYCOLOGY

Arabidopsis thaliana XRN2 is required for primary cleavage in the pre-ribosomal RNA

(2010) Monika Zakrzewska-Placzek et al.   NUCLEIC ACIDS RESEARCH

Ribosomal protein L35 is required for 27SB pre-rRNA processing in Saccharomyces cerevisiae

(2010) Reyes Babiano et al.   NUCLEIC ACIDS RESEARCH

Polyphyletic distribution of bristle formation in Chlorellaceae:Micractinium, Diacanthos, DidymogenesandHegewaldiagen. nov. (Trebouxiophyceae, Chlorophyta)

(2010) Thomas Pröschold et al.   PHYCOLOGICAL RESEARCH

Ulva diversity in the Yellow Sea during the large-scale green algal blooms in 2008-2009

(2010) Feng Liu et al.   PHYCOLOGICAL RESEARCH

Cryptic species of Euryakaina n. g. (Digenea: Cryptogonimidae) from sympatric lutjanids in the Indo-West Pacific

(2010) Terrence L. Miller et al.   SYSTEMATIC PARASITOLOGY

ITS2 secondary structure improves phylogeny estimation in a radiation of blue butterflies of the subgenus Agrodiaetus (Lepidoptera: Lycaenidae: Polyommatus )

(2009) Martin Wiemers et al.   BMC EVOLUTIONARY BIOLOGY

Evolution of rDNA ITS1 and ITS2 sequences and RNA secondary structures within members of the fungal genera Grosmannia and Leptographium

(2009) Taylor Mullineux et al.   FUNGAL GENETICS AND BIOLOGY

Evolutionary Diversification Indicated by Compensatory Base Changes in ITS2 Secondary Structures in a Complex Fungal Species, Rhizoctonia solani

(2009) Paavo Ahvenniemi et al.   JOURNAL OF MOLECULAR EVOLUTION

Molecular evidence for natural intergeneric hybridization between Liquidambar and Altingia

(2009) Wei Wu et al.   JOURNAL OF PLANT RESEARCH

The Final Step in 5.8S rRNA Processing Is Cytoplasmic in Saccharomyces cerevisiae

(2009) E. Thomson et al.   MOLECULAR AND CELLULAR BIOLOGY

Generalized structure and evolution of ITS1 and ITS2 rDNA in black flies (Diptera: Simuliidae)

(2009) Bernard LaRue et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

ITS2 sequence–structure analysis in phylogenetics: A how-to manual for molecular systematics

(2009) Jörg Schultz et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Compensatory base changes illuminate morphologically difficult taxonomy

(2009) Michael W. Ruhl et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Evolutionary inferences based on ITS rDNA and actin sequences reveal extensive diversity of the common lichen alga Asterochloris (Trebouxiophyceae, Chlorophyta)

(2009) Pavel Skaloud et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

rRNA Maturation in Yeast Cells Depleted of Large Ribosomal Subunit Proteins

(2009) Gisela Pöll et al.   PLoS One

The adenosine wedge: A new structural motif in ribosomal RNA

(2009) M. G. Gagnon et al.   RNA

Secondary Structure of the rRNA ITS2 Region Reveals Key Evolutionary Patterns in Acroporid Corals

(2008) Annette W. Coleman et al.   JOURNAL OF MOLECULAR EVOLUTION

jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION

Comparative study of the evolution of nuclear ribosomal spacers incorporating secondary structure analyzes within Dodonaeoideae, Hippocastanoideae and Xanthoceroideae (Sapindaceae)

(2008) Mark G. Harrington et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Comparative analysis of sequences and secondary structures of the rRNA internal transcribed spacer 2 (ITS2) in pollen beetles of the subfamily Meligethinae (Coleoptera, Nitidulidae): Potential use of slippage-derived sequences in molecular systematics

(2008) Marco Trizzino et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Is there a molecular key to the level of “biological species” in eukaryotes? A DNA guide

(2008) Annette W. Coleman   MOLECULAR PHYLOGENETICS AND EVOLUTION

Secondary structure of ITS2 rRNA provides taxonomic characters for systematic studies — a case in Lycoperdaceae (Basidiomycota)

(2008) Dirk Krüger et al.  

Pseudo-nitzschia pungens (Bacillariophyceae): A cosmopolitan diatom species?

(2007) Griet Casteleyn et al.   HARMFUL ALGAE