Internal Transcribed Spacer 2 (nu ITS2 rRNA) Sequence-Structure Phylogenetics: Towards an Automated Reconstruction of the Green Algal Tree of Life

Including RNA secondary structures improves accuracy and robustness in reconstruction of phylogenetic trees

(2010) Alexander Keller et al.   Biology Direct

5.8S motifs for the identification of pseudogenic ITS regions

(2010) Doerte Harpke et al.   Botany

DNA BARCODING OF CHLORARACHNIOPHYTES USING NUCLEOMORPH ITS SEQUENCES1

(2010) Gillian H. Gile et al.   JOURNAL OF PHYCOLOGY

HYPERSALINE SOIL SUPPORTS A DIVERSE COMMUNITY OF DUNALIELLA (CHLOROPHYCEAE)1

(2010) Mark A. Buchheim et al.   JOURNAL OF PHYCOLOGY

ITS2 sequence-structure phylogeny in the Scenedesmaceae with special reference to Coelastrum (Chlorophyta, Chlorophyceae), including the new genera Comasiella and Pectinodesmus

(2010) Eberhard Hegewald et al.   PHYCOLOGIA

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Validation of the ITS2 Region as a Novel DNA Barcode for Identifying Medicinal Plant Species

(2010) Shilin Chen et al.   PLoS One

Use of ITS2 Region as the Universal DNA Barcode for Plants and Animals

(2010) Hui Yao et al.   PLoS One

ITS2 secondary structure improves phylogeny estimation in a radiation of blue butterflies of the subgenus Agrodiaetus (Lepidoptera: Lycaenidae: Polyommatus )

(2009) Martin Wiemers et al.   BMC EVOLUTIONARY BIOLOGY

Biological agent detection technologies

(2009) JOHN P. JAKUPCIAK et al.   Molecular Ecology Resources

Selecting barcoding loci for plants: evaluation of seven candidate loci with species-level sampling in three divergent groups of land plants

(2009) MICHELLE L. HOLLINGSWORTH et al.   Molecular Ecology Resources

ITS2 sequence–structure analysis in phylogenetics: A how-to manual for molecular systematics

(2009) Jörg Schultz et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The ITS2 Database III—sequences and structures for phylogeny

(2009) Christian Koetschan et al.   NUCLEIC ACIDS RESEARCH

How Many Loci Does it Take to DNA Barcode a Crocus?

(2009) Ole Seberg et al.   PLoS One

A DNA barcode for land plants

(2009) et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Barcoding of Plants and Fungi

(2009) M. W. Chase et al.   SCIENCE

ProfDistS: (profile-) distance based phylogeny on sequence--structure alignments

(2008) M. Wolf et al.   BIOINFORMATICS

ITS2 data corroborate a monophyletic chlorophycean DO-group (Sphaeropleales)

(2008) Alexander Keller et al.   BMC EVOLUTIONARY BIOLOGY

Modelling cross-hybridization on phylogenetic DNA microarrays increases the detection power of closely related species

(2008) JULIA C. ENGELMANN et al.   Molecular Ecology Resources

Molecular systematics of Volvocales (Chlorophyceae, Chlorophyta) based on exhaustive 18S rRNA phylogenetic analyses

(2008) Takashi Nakada et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Is there a molecular key to the level of “biological species” in eukaryotes? A DNA guide

(2008) Annette W. Coleman   MOLECULAR PHYLOGENETICS AND EVOLUTION

Botanical identities

(2008) Heidi Ledford   NATURE

Morphology,rbcL phylogeny and distribution of distromatic Ulva (Ulvophyceae, Chlorophyta) in Ireland and southern Britain

(2008) Ciarán J. Loughnane et al.   PHYCOLOGIA

Multiple Multilocus DNA Barcodes from the Plastid Genome Discriminate Plant Species Equally Well

(2008) Aron J. Fazekas et al.   PLoS One