Gorgon and pathwalking: Macromolecular modeling tools for subnanometer resolution density maps
Published 2012 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Gorgon and pathwalking: Macromolecular modeling tools for subnanometer resolution density maps
Authors
Keywords
-
Journal
BIOPOLYMERS
Volume 97, Issue 9, Pages 655-668
Publisher
Wiley
Online
2012-04-04
DOI
10.1002/bip.22065
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- 4.4 Å cryo-EM structure of an enveloped alphavirus Venezuelan equine encephalitis virus
- (2011) Rui Zhang et al. EMBO JOURNAL
- Modeling protein structure at near atomic resolutions with Gorgon
- (2011) Matthew L. Baker et al. JOURNAL OF STRUCTURAL BIOLOGY
- CLICK—topology-independent comparison of biomolecular 3D structures
- (2011) M. N. Nguyen et al. NUCLEIC ACIDS RESEARCH
- Structural basis for scaffolding-mediated assembly and maturation of a dsDNA virus
- (2011) D.-H. Chen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Features and development ofCoot
- (2010) P. Emsley et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- 3.3 Å Cryo-EM Structure of a Nonenveloped Virus Reveals a Priming Mechanism for Cell Entry
- (2010) Xing Zhang et al. CELL
- Principles of membrane protein interactions with annular lipids deduced from aquaporin-0 2D crystals
- (2010) Richard K Hite et al. EMBO JOURNAL
- Building and Refining Protein Models within Cryo-electron Microscopy Density Maps Based on Homology Modeling and Multiscale Structure Refinement
- (2010) Jiang Zhu et al. JOURNAL OF MOLECULAR BIOLOGY
- The random-model method enables ab initio 3D reconstruction of asymmetric particles and determination of particle symmetry
- (2010) Eduardo Sanz-García et al. JOURNAL OF STRUCTURAL BIOLOGY
- Mechanism of folding chamber closure in a group II chaperonin
- (2010) Junjie Zhang et al. NATURE
- Cryo-EM of macromolecular assemblies at near-atomic resolution
- (2010) Matthew L Baker et al. Nature Protocols
- Structural changes in a marine podovirus associated with release of its genome into Prochlorococcus
- (2010) Xiangan Liu et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- 4.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement
- (2010) Y. Cong et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Atomic Structure of Human Adenovirus by Cryo-EM Reveals Interactions Among Protein Networks
- (2010) H. Liu et al. SCIENCE
- GTPase activation of elongation factor EF-Tu by the ribosome during decoding
- (2009) Jan-Christian Schuette et al. EMBO JOURNAL
- Refinement of Protein Structures into Low-Resolution Density Maps Using Rosetta
- (2009) Frank DiMaio et al. JOURNAL OF MOLECULAR BIOLOGY
- Backbone Model of an Aquareovirus Virion by Cryo-Electron Microscopy and Bioinformatics
- (2009) Lingpeng Cheng et al. JOURNAL OF MOLECULAR BIOLOGY
- Molecular interactions in rotavirus assembly and uncoating seen by high-resolution cryo-EM
- (2009) J. Z. Chen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Shape modeling and matching in identifying 3D protein structures
- (2008) Sasakthi Abeysinghe et al. COMPUTER-AIDED DESIGN
- Towards atomic resolution structural determination by single-particle cryo-electron microscopy
- (2008) Z Hong Zhou CURRENT OPINION IN STRUCTURAL BIOLOGY
- JADAS: A customizable automated data acquisition system and its application to ice-embedded single particles
- (2008) J ZHANG et al. JOURNAL OF STRUCTURAL BIOLOGY
- 3.88 Å structure of cytoplasmic polyhedrosis virus by cryo-electron microscopy
- (2008) Xuekui Yu et al. NATURE
- Backbone structure of the infectious ε15 virus capsid revealed by electron cryomicroscopy
- (2008) Wen Jiang et al. NATURE
- Near-atomic resolution using electron cryomicroscopy and single-particle reconstruction
- (2008) X. Zhang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Subnanometer-resolution electron cryomicroscopy-based domain models for the cytoplasmic region of skeletal muscle RyR channel
- (2008) I. I. Serysheva et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- De Novo Backbone Trace of GroEL from Single Particle Electron Cryomicroscopy
- (2008) Steven J. Ludtke et al. STRUCTURE
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now