The effects of intrinsic noise on the behaviour of bistable cell regulatory systems under quasi-steady state conditions

From invasion to latency: intracellular noise and cell motility as key controls of the competition between resource-limited cellular populations

(2015) Pilar Guerrero et al.   JOURNAL OF MATHEMATICAL BIOLOGY

Stochastic Multiscale Models of Cell Population Dynamics: Asymptotic and Numerical Methods

(2015) P. Guerrero et al.   Mathematical Modelling of Natural Phenomena

Model reduction for slow–fast stochastic systems with metastable behaviour

(2014) Maria Bruna et al.   JOURNAL OF CHEMICAL PHYSICS

Stochastic quasi-steady state approximations for asymptotic solutions of the chemical master equation

(2014) Tomás Alarcón   JOURNAL OF CHEMICAL PHYSICS

Bioattractors: dynamical systems theory and the evolution of regulatory processes

(2014) Johannes Jaeger et al.   JOURNAL OF PHYSIOLOGY-LONDON

The balance between cell cycle arrest and cell proliferation: control by the extracellular matrix and by contact inhibition

(2014) C. Gerard et al.   Interface Focus

Modelling mammalian cellular quiescence

(2014) G. Yao   Interface Focus

Separation of time-scales and model reduction for stochastic reaction networks

(2013) Hye-Won Kang et al.   ANNALS OF APPLIED PROBABILITY

Metastable behavior in Markov processes with internal states

(2013) Jay Newby et al.   JOURNAL OF MATHEMATICAL BIOLOGY

A mathematical model of HiF-1-mediated response to hypoxia on the G1/S transition

(2013) B. Bedessem et al.   MATHEMATICAL BIOSCIENCES

Stochastic Stabilization of Phenotypic States: The Genetic Bistable Switch as a Case Study

(2013) Marc Weber et al.   PLoS One

Stochastic mapping of the Michaelis-Menten mechanism

(2012) Éva Dóka et al.   JOURNAL OF CHEMICAL PHYSICS

Rigorous elimination of fast stochastic variables from the linear noise approximation using projection operators

(2012) Philipp Thomas et al.   PHYSICAL REVIEW E

Asymmetric Stochastic Switching Driven by Intrinsic Molecular Noise

(2012) David Frigola et al.   PLoS One

From quiescence to proliferation: Cdk oscillations drive the mammalian cell cycle

(2012) Claude Gérard et al.   Frontiers in Physiology

The molecular and mathematical basis of Waddington's epigenetic landscape: A framework for post-Darwinian biology?

(2011) Sui Huang   BIOESSAYS

Cellular Decision Making and Biological Noise: From Microbes to Mammals

(2011) Gábor Balázsi et al.   CELL

Legitimacy of the stochastic Michaelis–Menten approximation

(2011) K.R. Sanft et al.   IET Systems Biology

The resurgence of covalent drugs

(2011) Juswinder Singh et al.   NATURE REVIEWS DRUG DISCOVERY

Determining the Stability of Genetic Switches: Explicitly Accounting for mRNA Noise

(2011) Michael Assaf et al.   PHYSICAL REVIEW LETTERS

Stochastic theory of large-scale enzyme-reaction networks: Finite copy number corrections to rate equation models

(2010) Philipp Thomas et al.   JOURNAL OF CHEMICAL PHYSICS

Large fluctuations in stochastic population dynamics: momentum-space calculations

(2010) Michael Assaf et al.   JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT

Functional roles for noise in genetic circuits

(2010) Avigdor Eldar et al.   NATURE

Stochastic E2F Activation and Reconciliation of Phenomenological Cell-Cycle Models

(2010) Tae J. Lee et al.   PLOS BIOLOGY

Extinction Rate Fragility in Population Dynamics

(2009) M. Khasin et al.   PHYSICAL REVIEW LETTERS

The large deviation approach to statistical mechanics

(2009) Hugo Touchette   PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS

Temporal self-organization of the cyclin/Cdk network driving the mammalian cell cycle

(2009) C. Gerard et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Regulated Fluctuations in Nanog Expression Mediate Cell Fate Decisions in Embryonic Stem Cells

(2009) Tibor Kalmar et al.   PLOS BIOLOGY

Nature, Nurture, or Chance: Stochastic Gene Expression and Its Consequences

(2008) Arjun Raj et al.   CELL

Multiscale Modeling of Chemical Kinetics via the Master Equation

(2008) Shev MacNamara et al.   MULTISCALE MODELING & SIMULATION

Frequency-modulated nuclear localization bursts coordinate gene regulation

(2008) Long Cai et al.   NATURE

Stochastic switching as a survival strategy in fluctuating environments

(2008) Murat Acar et al.   NATURE GENETICS

Stochasticity and the Molecular Mechanisms of Induced Pluripotency

(2008) Ben D. MacArthur et al.   PLoS One

Stochasticity and Cell Fate

(2008) R. Losick et al.   SCIENCE