Bacterial community structures in rhizosphere microsites of ryegrass (Lolium perenne var. Nui) as revealed by pyrosequencing

Do genetic modifications in crops affect soil fungi? a review

(2014) S. E. Hannula et al.   BIOLOGY AND FERTILITY OF SOILS

Back to the basics: The need for ecophysiological insights to enhance our understanding of microbial behaviour in the rhizosphere

(2013) Francisco Dini-Andreote et al.   PLANT AND SOIL

The Variability of the 16S rRNA Gene in Bacterial Genomes and Its Consequences for Bacterial Community Analyses

(2013) Tomáš Větrovský et al.   PLoS One

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

(2012) Elmar Pruesse et al.   BIOINFORMATICS

Manipulating the soil microbiome to increase soil health and plant fertility

(2012) Jacqueline M. Chaparro et al.   BIOLOGY AND FERTILITY OF SOILS

Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (Brassica napus L. var oleifera) Evaluated through Next-Generation Sequencing Technology

(2012) Samanta B. de Campos et al.   MICROBIAL ECOLOGY

Pyrosequencing reveals how pulses influence rhizobacterial communities with feedback on wheat growth in the semiarid Prairie

(2012) Chao Yang et al.   PLANT AND SOIL

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Influence of nitrogen fertilisation on pasture culturable rhizobacteria occurrence and the role of environmental factors on their potential PGPR activities

(2011) Oscar A. Martínez et al.   BIOLOGY AND FERTILITY OF SOILS

Functional genomics analysis of plant growth-promoting rhizobacterial traits involved in rhizosphere competence

(2011) Matthieu Barret et al.   BIOLOGY AND FERTILITY OF SOILS

Soil-specific limitations for access and analysis of soil microbial communities by metagenomics

(2011) Nathalie Lombard et al.   FEMS MICROBIOLOGY ECOLOGY

Rhizosphere interactions between microorganisms and plants govern iron and phosphorus acquisition along the root axis – model and research methods

(2011) Petra Marschner et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil beneficial bacteria and their role in plant growth promotion: a review

(2010) Rifat Hayat et al.   ANNALS OF MICROBIOLOGY

VITCOMIC: visualization tool for taxonomic compositions of microbial communities based on 16S rRNA gene sequences

(2010) Hiroshi Mori et al.   BMC BIOINFORMATICS

Detection of aluminium tolerance plasmids and microbial diversity in the rhizosphere of plants grown in acidic volcanic soil

(2010) Milko A. Jorquera et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Identification of β-propeller phytase-encoding genes in culturable Paenibacillus and Bacillus spp. from the rhizosphere of pasture plants on volcanic soils

(2010) Milko A. Jorquera et al.   FEMS MICROBIOLOGY ECOLOGY

Change in Bacterial Community Structure in Response to Disturbance of Natural Hardwood and Secondary Coniferous Forest Soils in Central Taiwan

(2010) Yu-Te Lin et al.   MICROBIAL ECOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Soil metaproteomics: a review of an emerging environmental science. Significance, methodology and perspectives

(2009) F. Bastida et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

Comparative Resistance and Resilience of Soil Microbial Communities and Enzyme Activities in Adjacent Native Forest and Agricultural Soils

(2009) Guilherme Chaer et al.   MICROBIAL ECOLOGY

Bacterial communities are more dependent on soil type than fertilizer type, but the reverse is true for fungal communities

(2009) Chika Suzuki et al.   SOIL SCIENCE AND PLANT NUTRITION

Isolation of culturable phosphobacteria with both phytate-mineralization and phosphate-solubilization activity from the rhizosphere of plants grown in a volcanic soil

(2008) Milko A. Jorquera et al.   BIOLOGY AND FERTILITY OF SOILS

Selective progressive response of soil microbial community to wild oat roots

(2008) Kristen M DeAngelis et al.   ISME Journal