- Home
- Publications
- Publication Search
- Publication Details
Title
Alignment-free protein interaction network comparison
Authors
Keywords
-
Journal
BIOINFORMATICS
Volume 30, Issue 17, Pages i430-i437
Publisher
Oxford University Press (OUP)
Online
2014-08-26
DOI
10.1093/bioinformatics/btu447
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks
- (2013) Jialu Hu et al. BIOINFORMATICS
- BEAMS: backbone extraction and merge strategy for the global many-to-many alignment of multiple PPI networks
- (2013) Ferhat Alkan et al. BIOINFORMATICS
- A combinatorial approach to graphlet counting
- (2013) Tomaž Hočevar et al. BIOINFORMATICS
- Alignment-Free Sequence Comparison Based on Next-Generation Sequencing Reads
- (2013) Kai Song et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- PINALOG: a novel approach to align protein interaction networks—implications for complex detection and function prediction
- (2012) Hang T. T. Phan et al. BIOINFORMATICS
- Global network alignment using multiscale spectral signatures
- (2012) R. Patro et al. BIOINFORMATICS
- Surprising results on phylogenetic tree building methods based on molecular sequences
- (2012) Gaston H Gonnet BMC BIOINFORMATICS
- The Importance of Age and High Degree, in Protein-Protein Interaction Networks
- (2012) Tiago Rito et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Differential network biology
- (2012) Trey Ideker et al. Molecular Systems Biology
- Taxonomies of networks from community structure
- (2012) Jukka-Pekka Onnela et al. PHYSICAL REVIEW E
- What Evidence Is There for the Homology of Protein-Protein Interactions?
- (2012) Anna C. F. Lewis et al. PLoS Computational Biology
- Integrative network alignment reveals large regions of global network similarity in yeast and human
- (2011) Oleksii Kuchaiev et al. BIOINFORMATICS
- Evidence for the additions of clustered interacting nodes during the evolution of protein interaction networks from network motifs
- (2011) Zhongyang Liu et al. BMC EVOLUTIONARY BIOLOGY
- New powerful statistics for alignment-free sequence comparison under a pattern transfer model
- (2011) Xuemei Liu et al. JOURNAL OF THEORETICAL BIOLOGY
- Measuring the Evolutionary Rewiring of Biological Networks
- (2011) Chong Shou et al. PLoS Computational Biology
- How threshold behaviour affects the use of subgraphs for network comparison
- (2010) Tiago Rito et al. BIOINFORMATICS
- phangorn: phylogenetic analysis in R
- (2010) Klaus Peter Schliep BIOINFORMATICS
- Evolutionary analysis reveals low coverage as the major challenge for protein interaction network alignment
- (2010) Waqar Ali et al. Molecular BioSystems
- IsoRankN: spectral methods for global alignment of multiple protein networks
- (2009) C.-S. Liao et al. BIOINFORMATICS
- From evidence to inference: Probing the evolution of protein interaction networks
- (2009) Oliver Ratmann et al. HFSP Journal
- Automatic Parameter Learning for Multiple Local Network Alignment
- (2009) Jason Flannick et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Alignment-Free Sequence Comparison (I): Statistics and Power
- (2009) Gesine Reinert et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Human Protein Reference Database--2009 update
- (2008) T. S. Keshava Prasad et al. NUCLEIC ACIDS RESEARCH
- Database resources of the National Center for Biotechnology Information
- (2008) E. W. Sayers et al. NUCLEIC ACIDS RESEARCH
- Global alignment of multiple protein interaction networks with application to functional orthology detection
- (2008) R. Singh et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started