Modeling nucleosome position distributions from experimental nucleosome positioning maps
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Title
Modeling nucleosome position distributions from experimental nucleosome positioning maps
Authors
Keywords
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Journal
BIOINFORMATICS
Volume 29, Issue 19, Pages 2380-2386
Publisher
Oxford University Press (OUP)
Online
2013-07-12
DOI
10.1093/bioinformatics/btt404
References
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Related references
Note: Only part of the references are listed.- NucleoFinder: a statistical approach for the detection of nucleosome positions
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- NORMAL: accurate nucleosome positioning using a modified Gaussian mixture model
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- Micrococcal Nuclease Does Not Substantially Bias Nucleosome Mapping
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- Genome-wide nucleosome positioning during embryonic stem cell development
- (2012) Vladimir B Teif et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Probabilistic Inference for Nucleosome Positioning with MNase-Based or Sonicated Short-Read Data
- (2012) Xuekui Zhang et al. PLoS One
- nucleR: a package for non-parametric nucleosome positioning
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- High-Resolution Genome-wide Mapping of the Primary Structure of Chromatin
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- Determinants of nucleosome organization in primary human cells
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- Nucleosome positioning in a model of active chromatin remodeling enzymes
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- A Packing Mechanism for Nucleosome Organization Reconstituted Across a Eukaryotic Genome
- (2011) Z. Zhang et al. SCIENCE
- The Effect of Micrococcal Nuclease Digestion on Nucleosome Positioning Data
- (2010) Ho-Ryun Chung et al. PLoS One
- High-resolution nucleosome mapping reveals transcription-dependent promoter packaging
- (2009) A. Weiner et al. GENOME RESEARCH
- Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo
- (2009) Yong Zhang et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Nucleosome positioning from tiling microarray data
- (2008) M. Yassour et al. BIOINFORMATICS
- GeneTrack--a genomic data processing and visualization framework
- (2008) I. Albert et al. BIOINFORMATICS
- Identifying Positioned Nucleosomes with Epigenetic Marks in Human from ChIP-Seq
- (2008) Yong Zhang et al. BMC GENOMICS
- Integration of External Signaling Pathways with the Core Transcriptional Network in Embryonic Stem Cells
- (2008) Xi Chen et al. CELL
- A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning
- (2008) A. Valouev et al. GENOME RESEARCH
- Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains
- (2008) S. Cuddapah et al. GENOME RESEARCH
- The Insulator Binding Protein CTCF Positions 20 Nucleosomes around Its Binding Sites across the Human Genome
- (2008) Yutao Fu et al. PLoS Genetics
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