Large-scale analysis of conserved rare codon clusters suggests an involvement in co-translational molecular recognition events

Genes adopt non-optimal codon usage to generate cell cycle-dependent oscillations in protein levels

(2012) Milana Frenkel-Morgenstern et al.   Molecular Systems Biology

The imprint of codons on protein structure

(2011) Charlotte M. Deane et al.   Biotechnology Journal

Coupling between codon usage, translation and protein export in Escherichia coli

(2011) Yaramah M. Zalucki et al.   Biotechnology Journal

Birth, life and death of nascent polypeptide chains

(2011) Sujata Jha et al.   Biotechnology Journal

Molecular Mechanism of Co-translational Protein Targeting by the Signal Recognition Particle

(2011) Ishu Saraogi et al.   TRAFFIC

UniProt Knowledgebase: a hub of integrated protein data

(2011) M. Magrane et al.   Database-The Journal of Biological Databases and Curation

Inserting membrane proteins: The YidC/Oxa1/Alb3 machinery in bacteria, mitochondria, and chloroplasts

(2010) Peng Wang et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Increased incidence of rare codon clusters at 5' and 3' gene termini:implications for function

(2010) Thomas F Clarke et al.   BMC GENOMICS

α-Helical nascent polypeptide chains visualized within distinct regions of the ribosomal exit tunnel

(2010) Shashi Bhushan et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The European Nucleotide Archive

(2010) R. Leinonen et al.   NUCLEIC ACIDS RESEARCH

GenBank

(2010) D. A. Benson et al.   NUCLEIC ACIDS RESEARCH

Synonymous codon usage influences the local protein structure observed

(2010) Rhodri Saunders et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Structural Insight into Nascent Polypeptide Chain-Mediated Translational Stalling

(2009) B. Seidelt et al.   SCIENCE

Clustering of Codons with Rare Cognate tRNAs in Human Genes Suggests an Extra Level of Expression Regulation

(2009) Joanna L. Parmley et al.   PLoS Genetics

Analysis of the distribution of functionally relevant rare codons

(2008) Michael Widmann et al.   BMC GENOMICS

Electrostatics in the Ribosomal Tunnel Modulate Chain Elongation Rates

(2008) Jianli Lu et al.   JOURNAL OF MOLECULAR BIOLOGY

Synonymous Mutations and Ribosome Stalling Can Lead to Altered Folding Pathways and Distinct Minima

(2008) Chung-Jung Tsai et al.   JOURNAL OF MOLECULAR BIOLOGY

Rare Codons Cluster

(2008) Thomas F. Clarke et al.   PLoS One

A pause for thought along the co-translational folding pathway

(2008) Anton A. Komar   TRENDS IN BIOCHEMICAL SCIENCES