Genes adopt non-optimal codon usage to generate cell cycle-dependent oscillations in protein levels

The yeast rapid tRNA decay pathway primarily monitors the structural integrity of the acceptor and T-stems of mature tRNA

(2011) J. M. Whipple et al.   GENES & DEVELOPMENT

Determinants of translation efficiency and accuracy

(2011) H. Gingold et al.   Molecular Systems Biology

The Dynamics of Supply and Demand in mRNA Translation

(2011) Chris A. Brackley et al.   PLoS Computational Biology

An Evolutionarily Conserved Mechanism for Controlling the Efficiency of Protein Translation

(2010) Tamir Tuller et al.   CELL

A Role for Codon Order in Translation Dynamics

(2010) Gina Cannarozzi et al.   CELL

Synonymous but not the same: the causes and consequences of codon bias

(2010) Joshua B. Plotkin et al.   NATURE REVIEWS GENETICS

New Roles for Codon Usage

(2010) I. Weygand-Durasevic et al.   SCIENCE

Computational systems biology of the cell cycle

(2009) A. Csikasz-Nagy   BRIEFINGS IN BIOINFORMATICS

Regulation of Translation Initiation in Eukaryotes: Mechanisms and Biological Targets

(2009) Nahum Sonenberg et al.   CELL

Cyclebase.org: version 2.0, an updated comprehensive, multi-species repository of cell cycle experiments and derived analysis results

(2009) Nicholas Paul Gauthier et al.   NUCLEIC ACIDS RESEARCH

Coding-Sequence Determinants of Gene Expression in Escherichia coli

(2009) G. Kudla et al.   SCIENCE

Clustering of Codons with Rare Cognate tRNAs in Human Genes Suggests an Extra Level of Expression Regulation

(2009) Joanna L. Parmley et al.   PLoS Genetics

Mistranslation-Induced Protein Misfolding as a Dominant Constraint on Coding-Sequence Evolution

(2008) D. Allan Drummond et al.   CELL

Methods for kinetic and thermodynamic analysis of aminoacyl-tRNA synthetases

(2008) Christopher S. Francklyn et al.   METHODS

Dynamic Proteomics of Individual Cancer Cells in Response to a Drug

(2008) A. A. Cohen et al.   SCIENCE