A model-based approach to detect interspecific interactions during biofilm development

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(2016)   CELLULAR MICROBIOLOGY

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(2016)   FEMS MICROBIOLOGY REVIEWS

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(2016)   JOURNAL OF ECOLOGY

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(2016)   JOURNAL OF EVOLUTIONARY BIOLOGY

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(2015)   FEMS MICROBIOLOGY ECOLOGY

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(2015)   FEMS MICROBIOLOGY ECOLOGY

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(2015)   FEMS MICROBIOLOGY LETTERS

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(2015)   FEMS MICROBIOLOGY LETTERS

EasyABC: performing efficient approximate Bayesian computation sampling schemes using R

(2013) Franck Jabot et al.   Methods in Ecology and Evolution

Strong inter-population cooperation leads to partner intermixing in microbial communities

(2013) Babak Momeni et al.   eLife

Competition, Not Cooperation, Dominates Interactions among Culturable Microbial Species

(2012) Kevin R. Foster et al.   CURRENT BIOLOGY

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

Selective sweeps in growing microbial colonies

(2012) Kirill S Korolev et al.   PHYSICAL BIOLOGY

Bacterial swimmers that infiltrate and take over the biofilm matrix

(2012) A. Houry et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Analyzing Tropical Forest Tree Species Abundance Distributions Using a Nonneutral Model and through Approximate Bayesian Inference

(2011) Franck Jabot et al.   AMERICAN NATURALIST

Resistance of bacterial biofilms to disinfectants: a review

(2011) A. Bridier et al.   BIOFOULING

Comparative analysis of hydrogen-producing bacterial biofilms and granular sludge formed in continuous cultures of fermentative bacteria

(2011) Aleksandra Chojnacka et al.   BIORESOURCE TECHNOLOGY

iDynoMiCS: next-generation individual-based modelling of biofilms

(2011) Laurent A. Lardon et al.   ENVIRONMENTAL MICROBIOLOGY

Social evolution in multispecies biofilms

(2011) S. Mitri et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Pseudomonas aeruginosa quinolone quorum sensing signal alters the multicellular behaviour of Pseudomonas putida KT2440

(2011) Regina Fernández-Piñar et al.   RESEARCH IN MICROBIOLOGY

HIV with contact tracing: a case study in approximate Bayesian computation

(2010) M. G. B. Blum et al.   BIOSTATISTICS

The biofilm architecture of sixty opportunistic pathogens deciphered using a high throughput CLSM method

(2010) A. Bridier et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Approximate Bayesian Computation (ABC) in practice

(2010) Katalin Csilléry et al.   TRENDS IN ECOLOGY & EVOLUTION

Applying the digital image correlation method to estimate the mechanical properties of bacterial biofilms subjected to a wall shear stress

(2009) J. D. Mathias et al.   BIOFOULING

A stochastic dispersal-limited trait-based model of community dynamics

(2009) Franck Jabot   JOURNAL OF THEORETICAL BIOLOGY

Bacterial competition: surviving and thriving in the microbial jungle

(2009) Michael E. Hibbing et al.   NATURE REVIEWS MICROBIOLOGY

Model criticism based on likelihood-free inference, with an application to protein network evolution

(2009) O. Ratmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Inferring species interactions in tropical forests

(2009) I. Volkov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacteria can form interconnected microcolonies when a self-excreted product reduces their surface motility: evidence from individual-based model simulations

(2009) Nabil Mabrouk et al.   THEORY IN BIOSCIENCES

Electricity production and microbial biofilm characterization in cellulose-fed microbial fuel cells

(2008) Z. Ren et al.   WATER SCIENCE AND TECHNOLOGY