The application of bacterial indicator phylotypes to predict shrimp health status

Biogeography of the Sediment Bacterial Community Responds to a Nitrogen Pollution Gradient in the East China Sea

(2014) Jinbo Xiong et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bacterioplankton assemblages as biological indicators of shrimp health status

(2013) Demin Zhang et al.   ECOLOGICAL INDICATORS

Determining indicator taxa across spatial and seasonal gradients in the Columbia River coastal margin

(2013) Caroline S Fortunato et al.   ISME Journal

The Temporal Scaling of Bacterioplankton Composition: High Turnover and Predictability during Shrimp Cultivation

(2013) Jinbo Xiong et al.   MICROBIAL ECOLOGY

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Network Analysis Highlights Complex Interactions between Pathogen, Host and Commensal Microbiota

(2013) Sébastien Boutin et al.   PLoS One

Pathogen–host–environment interplay and disease emergence

(2013) Anneke Engering et al.   Emerging Microbes & Infections

A modified water quality index for intensive shrimp ponds of Litopenaeus vannamei

(2012) Zhen Ma et al.   ECOLOGICAL INDICATORS

The role of planktonicFlavobacteriain processing algal organic matter in coastal East Antarctica revealed using metagenomics and metaproteomics

(2012) Timothy J. Williams et al.   ENVIRONMENTAL MICROBIOLOGY

Phylotype-level 16S rRNA analysis reveals new bacterial indicators of health state in acute murine colitis

(2012) David Berry et al.   ISME Journal

A Nonluminescent and Highly Virulent Vibrio harveyi Strain Is Associated with “Bacterial White Tail Disease” of Litopenaeus vannamei Shrimp

(2012) Junfang Zhou et al.   PLoS One

Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom

(2012) H. Teeling et al.   SCIENCE

Hydrological and Water Quality Indices as management tools in marine shrimp culture

(2011) N.C. Ferreira et al.   AQUACULTURE

Alternatives to antibiotics for the control of bacterial disease in aquaculture

(2011) Tom Defoirdt et al.   CURRENT OPINION IN MICROBIOLOGY

Quantitative role of shrimp fecal bacteria in organic matter fluxes in a recirculating shrimp aquaculture system

(2011) Christine Beardsley et al.   FEMS MICROBIOLOGY ECOLOGY

Eutrophication in a tropical pond: Understanding the bacterioplankton and phytoplankton dynamics during a vibriosis outbreak using flow cytometric analyses

(2010) R. Lucas et al.   AQUACULTURE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Improving indicator species analysis by combining groups of sites

(2010) Miquel De Cáceres et al.   OIKOS

Associations between species and groups of sites: indices and statistical inference

(2009) Miquel De Cáceres et al.   ECOLOGY

The seasonal structure of microbial communities in the Western English Channel

(2009) Jack A. Gilbert et al.   ENVIRONMENTAL MICROBIOLOGY

Viral disease emergence in shrimp aquaculture: origins, impact and the effectiveness of health management strategies

(2009) Peter J. Walker et al.   Reviews in Aquaculture

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA