Comparative transcriptomic analysis of the regulation of flowering in temperate and tropical lotus (Nelumbo nucifera) by RNA-Seq

Genetic diversity and structure in populations of Nelumbo from America, Thailand and China: Implications for conservation and breeding

(2013) Mei Yang et al.   AQUATIC BOTANY

Transcriptome analysis of rice root heterosis by RNA-Seq

(2013) Rongrong Zhai et al.   BMC GENOMICS

Transcriptomic profiling of the salt-stress response in the wild recretohalophyte Reaumuria trigyna

(2013) Zhen-hua Dang et al.   BMC GENOMICS

Transcriptome profile analysis of young floral buds of fertile and sterile plants from the self-pollinated offspring of the hybrid between novel restorer line NR1 and Nsa CMS line in Brassica napus

(2013) Xiaohong Yan et al.   BMC GENOMICS

Deep RNA-Seq uncovers the peach transcriptome landscape

(2013) Lu Wang et al.   PLANT MOLECULAR BIOLOGY

Genome-Wide Analysis of Differentially Expressed Genes Relevant to Rhizome Formation in Lotus Root (Nelumbo nucifera Gaertn)

(2013) Libao Cheng et al.   PLoS One

Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)

(2013) Ray Ming et al.   GENOME BIOLOGY

Transcriptome analysis of Sacha Inchi (Plukenetia volubilis L.) seeds at two developmental stages

(2012) Xiaojuan Wang et al.   BMC GENOMICS

Transcriptome analysis at four developmental stages of grape berry (Vitis vinifera cv. Shiraz) provides insights into regulated and coordinated gene expression

(2012) Crystal Sweetman et al.   BMC GENOMICS

Transcriptomic analysis of ‘Suli’ pear (Pyrus pyrifolia white pear group) buds during the dormancy by RNA-Seq

(2012) Guoqin Liu et al.   BMC GENOMICS

Transcriptomic analysis of grape (Vitis vinifera L.) leaves during and after recovery from heat stress

(2012) Guo-Tian Liu et al.   BMC PLANT BIOLOGY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Arabidopsis FHY3 and HY5 Positively Mediate Induction of COP1 Transcription in Response to Photomorphogenic UV-B Light

(2012) X. Huang et al.   PLANT CELL

Characterization of SOC1's Central Role in Flowering by the Identification of Its Upstream and Downstream Regulators

(2012) R. G. H. Immink et al.   PLANT PHYSIOLOGY

Transcriptome profile analysis of flowering molecular processes of early flowering trifoliate orange mutant and the wild-type [Poncirus trifoliata (L.) Raf.] by massively parallel signature sequencing

(2011) Jin-Zhi Zhang et al.   BMC GENOMICS

De novo assembly of Euphorbia fischeriana root transcriptome identifies prostratin pathway related genes

(2011) Roberto A Barrero et al.   BMC GENOMICS

The effect of the floral repressor FLC on the timing and progression of vegetative phase change in Arabidopsis

(2011) M. R. Willmann et al.   DEVELOPMENT

RNA-Seq Analysis of a Soybean Near-Isogenic Line Carrying Bacterial Leaf Pustule-Resistant and -Susceptible Alleles

(2011) K. H. Kim et al.   DNA RESEARCH

Coordinated transcriptional regulation underlying the circadian clock in Arabidopsis

(2011) Gang Li et al.   NATURE CELL BIOLOGY

RNA sequencing: advances, challenges and opportunities

(2010) Fatih Ozsolak et al.   NATURE REVIEWS GENETICS

Seasonal and developmental timing of flowering

(2010) Richard Amasino   PLANT JOURNAL

Vernalization-Mediated VIN3 Induction Overcomes the LIKE-HETEROCHROMATIN PROTEIN1/POLYCOMB REPRESSION COMPLEX2-Mediated Epigenetic Repression

(2010) D.-H. Kim et al.   PLANT PHYSIOLOGY

Single nucleotide polymorphism (SNP) discovery in the polyploidBrassica napususing Solexa transcriptome sequencing

(2009) Martin Trick et al.   PLANT BIOTECHNOLOGY JOURNAL

Crosstalk between Cold Response and Flowering in Arabidopsis Is Mediated through the Flowering-Time Gene SOC1 and Its Upstream Negative Regulator FLC

(2009) E. Seo et al.   PLANT CELL

Over-expression of CONSTANS-LIKE 5 can induce flowering in short-day grown Arabidopsis

(2009) Miriam Hassidim et al.   PLANTA

Next-generation sequencing technologies and their implications for crop genetics and breeding

(2009) Rajeev K. Varshney et al.   TRENDS IN BIOTECHNOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

COP1-Mediated Ubiquitination of CONSTANS Is Implicated in Cryptochrome Regulation of Flowering in Arabidopsis

(2008) L.-J. Liu et al.   PLANT CELL

Regulation of CONSTANS and FLOWERING LOCUS T Expression in Response to Changing Light Quality

(2008) S. Y. Kim et al.   PLANT PHYSIOLOGY

Repression of FLOWERING LOCUS C and FLOWERING LOCUS T by the Arabidopsis Polycomb Repressive Complex 2 Components

(2008) Danhua Jiang et al.   PLoS One