RNA-Seq Analysis of a Soybean Near-Isogenic Line Carrying Bacterial Leaf Pustule-Resistant and -Susceptible Alleles

Ubiquitination in plant immunity

(2010) Marco Trujillo et al.   CURRENT OPINION IN PLANT BIOLOGY

Perception of theArabidopsisDanger Signal Peptide 1 Involves the Pattern Recognition ReceptorAtPEPR1 and Its Close HomologueAtPEPR2

(2010) Elzbieta Krol et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

Plant immunity: towards an integrated view of plant–pathogen interactions

(2010) Peter N. Dodds et al.   NATURE REVIEWS GENETICS

A chemical screen for suppressors of the avrRpm1-RPM1-dependent hypersensitive cell death response in Arabidopsis thaliana

(2010) Mario Serrano et al.   PLANTA

Arabidopsis Jasmonate Signaling Pathway

(2010) A. Gfeller et al.   Science Signaling

Fine mapping of a resistance gene to bacterial leaf pustule in soybean

(2010) Dong Hyun Kim et al.   THEORETICAL AND APPLIED GENETICS

Salicylic Acid, a Multifaceted Hormone to Combat Disease

(2009) A. Corina Vlot et al.   Annual Review of Phytopathology

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Measuring differential gene expression by short read sequencing: quantitative comparison to 2-channel gene expression microarrays

(2009) Joshua S Bloom et al.   BMC GENOMICS

Early molecular events in PAMP-triggered immunity

(2009) Cyril Zipfel   CURRENT OPINION IN PLANT BIOLOGY

Plant oxylipins: COI1/JAZs/MYC2 as the core jasmonic acid-signalling module

(2009) Andrea Chini et al.   FEBS Journal

Next generation sequencing of microbial transcriptomes: challenges and opportunities

(2009) Arnoud H.M. van Vliet   FEMS MICROBIOLOGY LETTERS

Current-generation high-throughput sequencing: deepening insights into mammalian transcriptomes

(2009) B. J. Blencowe et al.   GENES & DEVELOPMENT

RNA-Seq—quantitative measurement of expression through massively parallel RNA-sequencing

(2009) Brian T. Wilhelm et al.   METHODS

PRGdb: a bioinformatics platform for plant resistance gene analysis

(2009) Walter Sanseverino et al.   NUCLEIC ACIDS RESEARCH

The Arabidopsis CORONATINE INSENSITIVE1 Protein Is a Jasmonate Receptor

(2009) J. Yan et al.   PLANT CELL

Early transcriptomic events in microdissected Arabidopsis nematode-induced giant cells

(2009) Marta Barcala et al.   PLANT JOURNAL

Large-Scale Analysis of Putative Soybean Regulatory Gene Expression Identifies a Myb Gene Involved in Soybean Nodule Development

(2009) M. Libault et al.   PLANT PHYSIOLOGY

Dynamic Rearrangements Determine Genome Organization and Useful Traits in Soybean

(2009) K. D. Kim et al.   PLANT PHYSIOLOGY

The Role of WRKY Transcription Factors in Plant Immunity

(2009) S. P. Pandey et al.   PLANT PHYSIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

(2008) J. C. Marioni et al.   GENOME RESEARCH

Laser microdissection-assisted analysis of the functional fate of iron deficiency-induced root hairs in cucumber

(2008) Simonetta Santi et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcription Profiling of Soybean Nodulation byBradyrhizobium japonicum

(2008) Laurent Brechenmacher et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Plant pathogenesis-related (PR) proteins: A focus on PR peptides

(2008) Jan Sels et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

The role of JAR1 in Jasmonoyl-l-isoleucine production during Arabidopsis wound response

(2008) Walter P. Suza et al.   PLANTA

A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome

(2008) M. Sultan et al.   SCIENCE

Glucosinolate Metabolites Required for an Arabidopsis Innate Immune Response

(2008) N. K. Clay et al.   SCIENCE

Identification of Four Soybean Reference Genes for Gene Expression Normalization

(2008) M. Libault et al.   Plant Genome