The polyphyly of Plasmodium : comprehensive phylogenetic analyses of the malaria parasites (order Haemosporida) reveal widespread taxonomic conflict
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Title
The polyphyly of
Plasmodium
: comprehensive phylogenetic analyses of the malaria parasites (order Haemosporida) reveal widespread taxonomic conflict
Authors
Keywords
-
Journal
Royal Society Open Science
Volume 5, Issue 5, Pages 171780
Publisher
The Royal Society
Online
2018-05-23
DOI
10.1098/rsos.171780
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- (2016) João P. Maia et al. PARASITOLOGY INTERNATIONAL
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- ASTRAL: genome-scale coalescent-based species tree estimation
- (2014) S. Mirarab et al. BIOINFORMATICS
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- (2014) Alexandros Stamatakis BIOINFORMATICS
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- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
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- (2013) F. Prugnolle et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- High diversity of West African bat malaria parasites and a tight link with rodent Plasmodium taxa
- (2013) J. Schaer et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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