Coding and Non-coding RNAs, the Frontier Has Never Been So Blurred

Short intron-derived ncRNAs

(2017) Florent Hubé et al.   NUCLEIC ACIDS RESEARCH

Incredible RNA: Dual Functions of Coding and Noncoding

(2016)   MOLECULES AND CELLS

Analyses of Long Non-Coding RNA and mRNA profiling using RNA sequencing during the pre-implantation phases in pig endometrium

(2016) Yueying Wang et al.   Scientific Reports

Nonsense-mediated RNA decay - a switch and dial for regulating gene expression

(2015) Jenna E. Smith et al.   BIOESSAYS

A novel myogenic function residing in the 5′ non-coding region of Insulin receptor substrate-1 (Irs-1) transcript

(2015) Hikaru Nagano et al.   BMC CELL BIOLOGY

Pri sORF peptides induce selective proteasome-mediated protein processing

(2015) J. Zanet et al.   SCIENCE

Comprehensive comparison of large-scale tissue expression datasets

(2015) Alberto Santos et al.   PeerJ

PacBio Sequencing and Its Applications

(2015) Anthony Rhoads et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Power analysis and sample size estimation for RNA-Seq differential expression

(2014) Travers Ching et al.   RNA

Conserved Regulation of Cardiac Calcium Uptake by Peptides Encoded in Small Open Reading Frames

(2013) E. G. Magny et al.   SCIENCE

Coding vs non-coding: Translatability of short ORFs found in putative non-coding transcripts

(2011) Yuji Kageyama et al.   BIOCHIMIE

Coding or non-coding: Need they be exclusive?

(2011) Claire Francastel et al.   BIOCHIMIE

Identification of potentially new bifunctional RNA based on genome-wide data-mining of alternative splicing events

(2011) Damien Ulveling et al.   BIOCHIMIE

Dual-function RNA regulators in bacteria

(2011) Carin K. Vanderpool et al.   BIOCHIMIE

The evolution of RNAs with multiple functions

(2011) Marcel E. Dinger et al.   BIOCHIMIE

Ribosome Profiling of Mouse Embryonic Stem Cells Reveals the Complexity and Dynamics of Mammalian Proteomes

(2011) Nicholas T. Ingolia et al.   CELL

The p53 mRNA-Mdm2 interaction

(2011) Nadia Naski et al.   CELL CYCLE

When one is better than two: RNA with dual functions

(2010) Damien Ulveling et al.   BIOCHIMIE

A minimal base-pairing region of a bacterial small RNA SgrS required for translational repression of ptsG mRNA

(2010) Kimika Maki et al.   MOLECULAR MICROBIOLOGY

Steroid receptor RNA activator protein binds to and counteracts SRA RNA-mediated activation of MyoD and muscle differentiation

(2010) Florent Hubé et al.   NUCLEIC ACIDS RESEARCH

Small Peptides Switch the Transcriptional Activity of Shavenbaby During Drosophila Embryogenesis

(2010) T. Kondo et al.   SCIENCE

A liver X receptor (LXR)-β alternative splicing variant (LXRBSV) acts as an RNA co-activator of LXR-β

(2009) Koshi Hashimoto et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Noisy splicing, more than expression regulation, explains why some exons are subject to nonsense-mediated mRNA decay

(2009) Zhenguo Zhang et al.   BMC BIOLOGY

Intron-3 Retention/Splicing Controls Neuronal Expression of Apolipoprotein E in the CNS

(2008) Q. Xu et al.   JOURNAL OF NEUROSCIENCE

p53 mRNA controls p53 activity by managing Mdm2 functions

(2008) Marco M. Candeias et al.   NATURE CELL BIOLOGY

Differentiating Protein-Coding and Noncoding RNA: Challenges and Ambiguities

(2008) Marcel E. Dinger et al.   PLoS Computational Biology