A 250 plastome phylogeny of the grass family (Poaceae): topological support under different data partitions

Comparative plastome genomics and phylogenomics of Brachypodium : flowering time signatures, introgression and recombination in recently diverged ecotypes

(2017) Rubén Sancho et al.   NEW PHYTOLOGIST

What can we do with 1000 plastid genomes?

(2017) Julian Tonti-Filippini et al.   PLANT JOURNAL

One-third of the plastid genes evolved under positive selection in PACMAD grasses

(2017) Anthony Piot et al.   PLANTA

Towards a complete generic-level plastid phylogeny of the paleotropical woody bamboos (Poaceae: Bambusoideae)

(2017) Meng-Yuan Zhou et al.   TAXON

A worldwide phylogenetic classification of the Poaceae (Gramineae) II: An update and a comparison of two 2015 classifications

(2017) Robert J. Soreng et al.   Journal of Systematics and Evolution

Characterization of the complete chloroplast genome sequence of Littledalea racemosa Keng (Poaceae: Bromeae)

(2017) Yuping Liu et al.   Conservation Genetics Resources

Are diversification rates and chromosome evolution in the temperate grasses (Pooideae) associated with major environmental changes in the Oligocene-Miocene?

(2017) Manuel Pimentel et al.   PeerJ

Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1)

(2017) Jeffery M. Saarela et al.   PhytoKeys

Museomics resolve the systematics of an endangered grass lineage endemic to north-western Madagascar

(2016) Christian Silva et al.   ANNALS OF BOTANY

Sequencing and phylogenetic analysis of the chloroplast genome of Pseudosasa japonica f. Akebonosuji

(2016) Mingbing Zhou et al.   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

The floral transcriptomes of four bamboo species (Bambusoideae; Poaceae): support for common ancestry among woody bamboos

(2016) William P. Wysocki et al.   BMC GENOMICS

Evolutionary relationships in Panicoid grasses based on plastome phylogenomics (Panicoideae; Poaceae)

(2016) Sean V. Burke et al.   BMC PLANT BIOLOGY

Plastid phylogenomic study of species within the genus Zea: rates and patterns of three classes of microstructural changes

(2016) Lauren M. Orton et al.   CURRENT GENETICS

Phylogenomics and Plastome Evolution of the Chloridoid Grasses (Chloridoideae: Poaceae)

(2016) Melvin R. Duvall et al.   INTERNATIONAL JOURNAL OF PLANT SCIENCES

Evolutionary history of chloridoid grasses estimated from 122 nuclear loci

(2016) Amanda E. Fisher et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Multi-locus plastid phylogenetic biogeography supports the Asian hypothesis of the temperate woody bamboos (Poaceae: Bambusoideae)

(2016) Xian-Zhi Zhang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogenetic estimation and morphological evolution of Arundinarieae (Bambusoideae: Poaceae) based on plastome phylogenomic analysis

(2016) Lakshmi Attigala et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Evolutionary implications of C3-C4intermediates in the grassAlloteropsis semialata

(2016) Marjorie R. Lundgren et al.   PLANT CELL AND ENVIRONMENT

Phylogenetic relationships of the ‘Briza complex’ to other members of the subfamily Pooideae (Poaceae)

(2016) Nannie Persson et al.   Plant Ecology and Evolution

Madagascar's grasses and grasslands: anthropogenic or natural?

(2016) Maria S. Vorontsova et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A molecular phylogeny and classification of the Cynodonteae (Poaceae: Chloridoideae) with four new genera: Orthacanthus, Triplasiella, Tripogonella, and Zaqiqah; three new subtribes: Dactylocteniinae, Orininae, and Zaqiqahinae; and a subgeneric classification of Distichlis

(2016) PaulM. Peterson et al.   TAXON

The complete chloroplast genome sequence of the Purple Feathergrass Stipa purpurea (Poales: Poaceae)

(2016) Dengxue Lu et al.   Conservation Genetics Resources

Phylogenomics and Plastome Evolution of Tropical Forest Grasses (Leptaspis, Streptochaeta: Poaceae)

(2016) Sean V. Burke et al.   Frontiers in Plant Science

The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae)

(2016) Sampath Perumal et al.   Mitochondrial DNA Part B-Resources

Genome skimming reveals the complete chloroplast genome of Ampelocalamus naibunensis (Poaceae: Bambusoideae: Arundinarieae) with phylogenomic implication

(2016) Xian-Zhi Zhang et al.   Mitochondrial DNA Part B-Resources

The complete plastid genome of the wild rice species Oryza brachyantha (Poaceae)

(2016) Fengqi Liu et al.   Mitochondrial DNA Part B-Resources

The First Complete Plastid Genome from Joinvilleaceae (J. ascendens; Poales) Shows Unique and Unpredicted Rearrangements

(2016) William P. Wysocki et al.   PLoS One

Phylogeny and photosynthesis of the grass tribe Paniceae

(2015) Jacob D. Washburn et al.   AMERICAN JOURNAL OF BOTANY

Phylogenetic reconstruction using four low-copy nuclear loci strongly supports a polyphyletic origin of the genusSorghum

(2015) Jennifer S. Hawkins et al.   ANNALS OF BOTANY

Evolution of the bamboos (Bambusoideae; Poaceae): a full plastome phylogenomic analysis

(2015) William P Wysocki et al.   BMC EVOLUTIONARY BIOLOGY

Resolving deep relationships of PACMAD grasses: a phylogenomic approach

(2015) Joseph L. Cotton et al.   BMC PLANT BIOLOGY

Phylogenetic inference and SSR characterization of tropical woody bamboos tribe Bambuseae (Poaceae: Bambusoideae) based on complete plastid genome sequences

(2015) Leila do Nascimento Vieira et al.   CURRENT GENETICS

Photosynthetic innovation broadens the niche within a single species

(2015) Marjorie R. Lundgren et al.   ECOLOGY LETTERS

Complete chloroplast DNA sequences of Zanduri wheat (Triticum spp.)

(2015) M. Gogniashvili et al.   GENETIC RESOURCES AND CROP EVOLUTION

Evolution of the beta-amylase gene in the temperate grasses: Non-purifying selection, recombination, semiparalogy, homeology and phylogenetic signal

(2015) Miguel Minaya et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Twisted trees and inconsistency of tree estimation when gaps are treated as missing data – The impact of model mis-specification in distance corrections

(2015) Emily Jane McTavish et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A multi-locus analysis of phylogenetic relationships within grass subfamily Pooideae (Poaceae) inferred from sequences of nuclear single copy gene regions compared with plastid DNA

(2015) Anne Hochbach et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Multilocus species tree analyses resolve the ancient radiation of the subtribe Zizaniinae (Poaceae)

(2015) Liang Tang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The chloroplast genome of the hexaploid Spartina maritima (Poaceae, Chloridoideae): Comparative analyses and molecular dating

(2015) M. Rousseau-Gueutin et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Plastid genomes reveal support for deep phylogenetic relationships and extensive rate variation among palms and other commelinid monocots

(2015) Craig F. Barrett et al.   NEW PHYTOLOGIST

Maximum Likelihood Phylogenetic Inference is Consistent on Multiple Sequence Alignments, with or without Gaps

(2015) Jakub Truszkowski et al.   SYSTEMATIC BIOLOGY

A molecular phylogeny and classification of the Eleusininae with a new genus, Micrachne (Poaceae: Chloridoideae: Cynodonteae)

(2015) Paul M. Peterson et al.   TAXON

Molecular and morphological evidence for a new grass genus,Dupontiopsis(Poaceae tribe Poeae subtribe Poinae s.l.), endemic to alpine Japan, and implications for the reticulate origin ofDupontiaandArctophilawithin Poinae s.l.

(2015) Robert J. SORENG et al.   Journal of Systematics and Evolution

A worldwide phylogenetic classification of the Poaceae (Gramineae)

(2015) Robert J. SORENG et al.   Journal of Systematics and Evolution

Australian spinifex grasses: new names in Triodia for Monodia and Symplectrodia

(2015) Michael Douglas Crisp et al.   Phytotaxa

Phylogenetic relationships among the Iranian Triticum diploid gene pool as inferred from the loci Acc1 and Pgk1

(2015) Fatemeh Nasernakhaei et al.   Phytotaxa

Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species

(2015) Kyunghee Kim et al.   Scientific Reports

Evidence for horizontal transfer of mitochondrial DNA to the plastid genome in a bamboo genus

(2015) Peng-Fei Ma et al.   Scientific Reports

Relationships of wild and domesticated rices (Oryza AA genome species) based upon whole chloroplast genome sequences

(2015) Peterson W. Wambugu et al.   Scientific Reports

Key innovation or adaptive change? A test of leaf traits using Triodiinae in Australia

(2015) A. Toon et al.   Scientific Reports

Plastid phylogenomics of the cool-season grass subfamily: clarification of relationships among early-diverging tribes

(2015) Jeffery M. Saarela et al.   AoB Plants

Complete chloroplast genome sequence of green foxtail (Setaria viridis), a promising model system for C4photosynthesis

(2015) Shuo Wang et al.   Mitochondrial DNA Part A

The complete chloroplast genome sequence ofChikusichloa aquatica(Poaceae: Oryzeae)

(2015) Jie Zhang et al.   Mitochondrial DNA Part A

The complete plastid genome of the middle Asian endemic of Stipa lipskyi (Poaceae)

(2015) Kamil Myszczyński et al.   Mitochondrial DNA Part A

The complete chloroplast genome of an irreplaceable dietary and model crop, foxtail millet (Setaria italica)

(2015) Shuo Wang et al.   Mitochondrial DNA Part A

The complete chloroplast genomes of three Korean Echinochloa crus-galli accessions

(2015) Gyoungju Nah et al.   Mitochondrial DNA Part A

The Complete Chloroplast Genome of Guadua angustifolia and Comparative Analyses of Neotropical-Paleotropical Bamboos

(2015) Miaoli Wu et al.   PLoS One

Phylogenetics of Panicoideae (Poaceae) based on chloroplast and nuclear DNA sequences

(2015) Atchara Teerawatananon et al.   TELOPEA

Biogeography and phylogenomics of New World Bambusoideae (Poaceae), revisited

(2014) Sean V. Burke et al.   AMERICAN JOURNAL OF BOTANY

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Phylogenetic investigation and divergence dating ofPoa(Poaceae, tribe Poeae) in the Australasian region

(2014) Joanne L. Birch et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

From museums to genomics: old herbarium specimens shed light on a C3 to C4 transition

(2014) Guillaume Besnard et al.   JOURNAL OF EXPERIMENTAL BOTANY

The whole chloroplast genome of wild rice (Oryza australiensis)

(2014) Zhiqiang Wu et al.   Mitochondrial DNA

The complete chloroplast genome sequence of theBambusa multiplex(Poaceae: Bambusoideae)

(2014) Ju Gao et al.   Mitochondrial DNA

The complete chloroplast genome sequence of thePhyllostachys sulphurea(Poaceae: Bambusoideae)

(2014) Ju Gao et al.   Mitochondrial DNA

Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics and phylogeography studies

(2014) Cédric Mariac et al.   Molecular Ecology Resources

A molecular phylogeny of Raddia and its allies within the tribe Olyreae (Poaceae, Bambusoideae) based on noncoding plastid and nuclear spacers

(2014) Reyjane P. Oliveira et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The chloroplast view of the evolution of polyploid wheat

(2014) Piotr Gornicki et al.   NEW PHYTOLOGIST

Independent allopolyploidization events preceded speciation in the temperate and tropical woody bamboos

(2014) Jimmy K. Triplett et al.   NEW PHYTOLOGIST

Phylogeny of sections Clavelligerae and Pectinatae of Panicum (Poaceae, Panicoideae, Paniceae): establishment of the new subtribe Dichantheliinae and the genus Adenochloa

(2014) Fernando O. Zuloaga et al.   PLANT SYSTEMATICS AND EVOLUTION

Phylogenomics, molecular evolution, and estimated ages of lineages from the deep phylogeny of Poaceae

(2014) Samuel S. Jones et al.   PLANT SYSTEMATICS AND EVOLUTION

A phylogenetic study of subtribe Otachyriinae (Poaceae, Panicoideae, Paspaleae)

(2014) J. M. Acosta et al.   PLANT SYSTEMATICS AND EVOLUTION

Sequencing of Chloroplast Genomes from Wheat, Barley, Rye and Their Relatives Provides a Detailed Insight into the Evolution of the Triticeae Tribe

(2014) Christopher P. Middleton et al.   PLoS One

Combined Analysis of the Chloroplast Genome and Transcriptome of the Antarctic Vascular Plant Deschampsia antarctica Desv

(2014) Jungeun Lee et al.   PLoS One

Infrageneric Phylogeny and Temporal Divergence of Sorghum (Andropogoneae, Poaceae) Based on Low-Copy Nuclear and Plastid Sequences

(2014) Qing Liu et al.   PLoS One

Echinochloa Chloroplast Genomes: Insights into the Evolution and Taxonomic Identification of Two Weedy Species

(2014) Chu-Yu Ye et al.   PLoS One

Allopolyploidy, diversification, and the Miocene grassland expansion

(2014) Matt C. Estep et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chloroplast Phylogenomic Analyses Resolve Deep-Level Relationships of an Intractable Bamboo Tribe Arundinarieae (Poaceae)

(2014) Peng-Fei Ma et al.   SYSTEMATIC BIOLOGY

Molecular Phylogeny Estimation of the Bamboo Genus Chusquea (Poaceae: Bambusoideae: Bambuseae) and Description of Two New Subgenera

(2014) Amanda E. Fisher et al.   SYSTEMATIC BOTANY

Phylogenetic relationships in the grass family (Poaceae) based on the nuclear single copy locus topoisomerase 6 compared with chloroplast DNA

(2014) Anne Blaner et al.   SYSTEMATICS AND BIODIVERSITY

A molecular phylogeny and classification of the Cteniinae, Farragininae, Gouiniinae, Gymnopogoninae, Perotidinae, and Trichoneurinae (Poaceae: Chloridoideae: Cynodonteae)

(2014) Paul M. Peterson et al.   TAXON

(2332) Proposal to conserve the name Sporobolus against Spartina, Crypsis, Ponceletia, and Heleochloa (Poaceae: Chloridoideae: Sporobolinae)

(2014) Paul M. Peterson et al.   TAXON

A molecular phylogeny and new subgeneric classification of Sporobolus (Poaceae: Chloridoideae: Sporobolinae)

(2014) Paul M. Peterson et al.   TAXON

A multi-step comparison of short-read full plastome sequence assembly methods in grasses

(2014) William P. Wysocki et al.   TAXON

A new genus and a major temperate bamboo lineage of the Arundinarieae (Poaceae: Bambusoideae) from Sri Lanka based on a multi-locus plastid phylogeny 

(2014) Lakshmi Attigala et al.   Phytotaxa

Phylogenomics and taxonomy of Lecomtelleae (Poaceae), an isolated panicoid lineage from Madagascar

(2013) Guillaume Besnard et al.   ANNALS OF BOTANY

Missing Data and Influential Sites: Choice of Sites for Phylogenetic Analysis Can Be As Important As Taxon Sampling and Model Choice

(2013) Liat Shavit Grievink et al.   Genome Biology and Evolution

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Higher level phylogenetic relationships within the bamboos (Poaceae: Bambusoideae) based on five plastid markers

(2013) Scot A. Kelchner   MOLECULAR PHYLOGENETICS AND EVOLUTION

The monophyly of Chimonocalamus and conflicting gene trees in Arundinarieae (Poaceae: Bambusoideae) inferred from four plastid and two nuclear markers

(2013) Hong-Mei Yang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Miocene–Pliocene speciation, introgression, and migration of Patis and Ptilagrostis (Poaceae: Stipeae)

(2013) Konstantin Romaschenko et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogenomic Analyses of Nuclear Genes Reveal the Evolutionary Relationships within the BEP Clade and the Evidence of Positive Selection in Poaceae

(2013) Lei Zhao et al.   PLoS One

Transcriptome Sequencing and Analysis of the Fast Growing Shoots of Moso Bamboo (Phyllostachys edulis)

(2013) Zhenhua Peng et al.   PLoS One

Parianella (Poaceae, Bambusoideae): morphological and biogeographical information reveals a new genus of herbaceous bamboos from Brazil

(2013) FABRÍCIO MOREIRA FERREIRA et al.   Phytotaxa

Plastome Sequence Determination and Comparative Analysis for Members of the Lolium - Festuca Grass Species Complex

(2013) Melanie L. Hand et al.   G3-Genes Genomes Genetics

Early inflorescence development in the grasses (Poaceae)

(2013) Elizabeth A. Kellogg et al.   Frontiers in Plant Science

Plastome sequences of two New World bamboos-Arundinaria gigantea and Cryptochloa strictiflora (Poaceae)-extend phylogenomic understanding of Bambusoideae

(2012) Sean V. Burke et al.   AMERICAN JOURNAL OF BOTANY

Evolution and taxonomic split of the model grass Brachypodium distachyon

(2012) Pilar Catalán et al.   ANNALS OF BOTANY

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Phylogeny of the Paniceae (Poaceae: Panicoideae): integrating plastid DNA sequences and morphology into a new classification

(2012) Osvaldo Morrone et al.   CLADISTICS

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Impact of Missing Data on Phylogenies Inferred from Empirical Phylogenomic Data Sets

(2012) Béatrice Roure et al.   MOLECULAR BIOLOGY AND EVOLUTION

Complex evolution in Arundinarieae (Poaceae: Bambusoideae): Incongruence between plastid and nuclear GBSSI gene phylogenies

(2012) Yu-Xiao Zhang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Polyphyly of the grass tribe Hainardieae (Poaceae: Pooideae): identification of its different lineages based on molecular phylogenetics, including morphological and cytogenetic characteristics

(2012) Julia Schneider et al.   ORGANISMS DIVERSITY & EVOLUTION

Detecting Individual Sites Subject to Episodic Diversifying Selection

(2012) Ben Murrell et al.   PLoS Genetics

Multigenic phylogeny and analysis of tree incongruences in Triticeae (Poaceae)

(2011) Juan S Escobar et al.   BMC EVOLUTIONARY BIOLOGY

Testing Darwin’s naturalization hypothesis in the Azores

(2011) Hanno Schaefer et al.   ECOLOGY LETTERS

Effect of genetic convergence on phylogenetic inference

(2011) Pascal-Antoine Christin et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The phylogeny of the BEP clade in grasses revisited: Evidence from the whole-genome sequences of chloroplasts

(2011) Zhi-Qiang Wu et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

New grass phylogeny resolves deep evolutionary relationships and discovers C4 origins

(2011)   NEW PHYTOLOGIST

High-Throughput Sequencing of Six Bamboo Chloroplast Genomes: Phylogenetic Implications for Temperate Woody Bamboos (Poaceae: Bambusoideae)

(2011) Yun-Jie Zhang et al.   PLoS One

Chloroplast Genome Variation in Upland and Lowland Switchgrass

(2011) Hugh A. Young et al.   PLoS One

Duthieeae, a new tribe of grasses (Poaceae) identified among the early diverging lineages of subfamily Pooideae: molecular phylogenetics, morphological delineation, cytogenetics and biogeography

(2011) JULIA SCHNEIDER et al.   SYSTEMATICS AND BIODIVERSITY

Chloroplast genome sequence confirms distinctness of Australian and Asian wild rice

(2011) Daniel L. E. Waters et al.   Ecology and Evolution

Phylogeny and a new tribal classification of the Panicoideae s.l. (Poaceae) based on plastid and nuclear sequence data and structural data

(2010) J. Gabriel Sánchez-Ken et al.   AMERICAN JOURNAL OF BOTANY

The chloroplast genome of Anomochloa marantoidea (Anomochlooideae; Poaceae) comprises a mixture of grass-like and unique features

(2010) Leah M. Morris et al.   AMERICAN JOURNAL OF BOTANY

Migration of endpoints of two genes relative to boundaries between regions of the plastid genome in the grass family (Poaceae)

(2010) Jerrold I. Davis et al.   AMERICAN JOURNAL OF BOTANY

Phylogenetic studies favour the unification of Pennisetum, Cenchrus and Odontelytrum (Poaceae): a combined nuclear, plastid and morphological analysis, and nomenclatural combinations in Cenchrus

(2010) M. Amelia Chemisquy et al.   ANNALS OF BOTANY

A Generic Classification of the Danthonioideae (Poaceae)1

(2010) H. Peter Linder et al.   ANNALS OF THE MISSOURI BOTANICAL GARDEN

Assembling the Tree of the Monocotyledons: Plastome Sequence Phylogeny and Evolution of Poales1

(2010) Thomas J. Givnish et al.   ANNALS OF THE MISSOURI BOTANICAL GARDEN

Phylogenetic relationships among Southeast Asian climbing bamboos (Poaceae: Bambusoideae) and the Bambusa complex

(2010) W.L. Goh et al.   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

A maximum pseudo-likelihood approach for estimating species trees under the coalescent model

(2010) Liang Liu et al.   BMC EVOLUTIONARY BIOLOGY

Inference of phylogenetic relationships among the subfamilies of grasses (Poaceae: Poales) using meso-scale exemplar-based sampling of the plastid genome

(2010) Jeffery M. Saarela et al.   Botany

A classification of the Chloridoideae (Poaceae) based on multi-gene phylogenetic trees

(2010) Paul M. Peterson et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Large multi-locus plastid phylogeny of the tribe Arundinarieae (Poaceae: Bambusoideae) reveals ten major lineages and low rate of molecular divergence

(2010) Chun-Xia Zeng et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Genome sequencing and analysis of the model grass Brachypodium distachyon

(2010) John P. Vogel et al.   NATURE

Chloroplast genome sequences from total DNA for plant identification

(2010) Catherine J. Nock et al.   PLANT BIOTECHNOLOGY JOURNAL

Phylogeny of the Temperate Bamboos (Poaceae: Bambusoideae: Bambuseae) with an Emphasis on Arundinaria and Allies

(2010) Jimmy K. Triplett et al.   SYSTEMATIC BOTANY

Connorochloa: a new genus in Triticeae

(2009) Mary E. Barkworth et al.   BREEDING SCIENCE

Complete Chloroplast Genome Sequence of a Major Allogamous Forage Species, Perennial Ryegrass (Lolium perenne L.)

(2009) K. Diekmann et al.   DNA RESEARCH

A Phylogeny of Setaria (Poaceae, Panicoideae, Paniceae) and Related Genera Based on the Chloroplast Gene ndhF

(2009) Elizabeth A. Kellogg et al.   INTERNATIONAL JOURNAL OF PLANT SCIENCES

The Complete Chloroplast Genome of Coix lacryma-jobi and a Comparative Molecular Evolutionary Analysis of Plastomes in Cereals

(2009) Charles H. Leseberg et al.   JOURNAL OF MOLECULAR EVOLUTION

Phylogeny and biogeography of the rice tribe (Oryzeae): Evidence from combined analysis of 20 chloroplast fragments

(2009) Liang Tang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The Impact of Outgroup Choice and Missing Data on Major Seed Plant Phylogenetics Using Genome-Wide EST Data

(2009) Jose Eduardo de la Torre-Bárcena et al.   PLoS One

Paraphyly in the Bamboo Subtribe Chusqueinae (Poaceae: Bambusoideae) and a Revised Infrageneric Classification for Chusquea

(2009) Amanda E. Fisher et al.   SYSTEMATIC BOTANY

Complete nucleotide sequence of Dendrocalamus latiflorus and Bambusa oldhamii chloroplast genomes

(2009) F.-H. Wu et al.   TREE PHYSIOLOGY

A molecular phylogeny of the genus Alloteropsis (Panicoideae, Poaceae) suggests an evolutionary reversion from C4 to C3 photosynthesis

(2008) Douglas G. Ibrahim et al.   ANNALS OF BOTANY

Phylogenetic relationships in subtribe Poinae (Poaceae, Poeae) based on nuclear ITS and plastid trnT–trnL–trnF sequencesThis paper is one of a selection of papers published in the Special Issue on Systematics Research.

(2008) Lynn J. Gillespie et al.   Botany

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

The age of the grasses and clusters of origins of C4photosynthesis

(2008) ALBERTO VICENTINI et al.   GLOBAL CHANGE BIOLOGY

Use of flowering gene FLOWERING LOCUS T (FT) homologs in the phylogenetic analysis of bambusoid and early diverging grasses

(2008) Yoko Hisamoto et al.   JOURNAL OF PLANT RESEARCH

Non-monophyly of the woody bamboos (Bambuseae; Poaceae): a multi-gene region phylogenetic analysis of Bambusoideae s.s.

(2008) Sarawood Sungkaew et al.   JOURNAL OF PLANT RESEARCH

Evolutionary Switch and Genetic Convergence on rbcL following the Evolution of C4 Photosynthesis

(2008) Pascal-Antoine Christin et al.   MOLECULAR BIOLOGY AND EVOLUTION

Large multi-gene phylogenetic trees of the grasses (Poaceae): Progress towards complete tribal and generic level sampling

(2008) Yanis Bouchenak-Khelladi et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A molecular phylogenetic and fruit evolutionary analysis of the major groups of the paleotropical woody bamboos (Gramineae: Bambusoideae) based on nuclear ITS, GBSSI gene and plastid trnL-F DNA sequences

(2008) Han-Qi Yang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Oligocene CO2 Decline Promoted C4 Photosynthesis in Grasses

(2007) Pascal-Antoine Christin et al.   CURRENT BIOLOGY

Dated historical biogeography of the temperate Loliinae (Poaceae, Pooideae) grasses in the northern and southern hemispheres

(2007) Luis A. Inda et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION