Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species
Authors
Keywords
-
Journal
Scientific Reports
Volume 5, Issue 1, Pages -
Publisher
Springer Nature
Online
2015-10-28
DOI
10.1038/srep15655
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Comparative analysis of the complete chloroplast genome sequences of a normal male-fertile cytoplasm and two different cytoplasms conferring cytoplasmic male sterility in onion (Allium cepaL.)
- (2015) S. Kim et al. JOURNAL OF HORTICULTURAL SCIENCE & BIOTECHNOLOGY
- Intragenomic polymorphisms among high-copy loci: a genus-wide study of nuclear ribosomal DNA inAsclepias(Apocynaceae)
- (2015) Kevin Weitemier et al. PeerJ
- Complete Chloroplast Genome Sequence of Tartary Buckwheat (Fagopyrum tataricum) and Comparative Analysis with Common Buckwheat (F. esculentum)
- (2015) Kwang-Soo Cho et al. PLoS One
- Comprehensive Survey of Genetic Diversity in Chloroplast Genomes and 45S nrDNAs within Panax ginseng Species
- (2015) Kyunghee Kim et al. PLoS One
- The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication
- (2014) Muhua Wang et al. NATURE GENETICS
- Major repeat components covering one-third of the ginseng (Panax ginsengC.A. Meyer) genome and evidence for allotetraploidy
- (2014) Hong-Il Choi et al. PLANT JOURNAL
- Australian Wild Rice Reveals Pre-Domestication Origin of Polymorphism Deserts in Rice Genome
- (2014) Gopala Krishnan S. et al. PLoS One
- Rapid diversification of fiveOryzaAA genomes associated with rice adaptation
- (2014) Qun-Jie Zhang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Defining the genome structure of `Tongil' rice, an important cultivar in the Korean "Green Revolution"
- (2014) Backki Kim et al. Rice
- Practical application of DNA markers for high-throughput authentication of Panax ginseng and Panax quinquefolius from commercial ginseng products
- (2014) Juyeon Jung et al. Journal of Ginseng Research
- High Occurrence of Functional New Chimeric Genes in Survey of Rice Chromosome 3 Short Arm Genome Sequences
- (2013) Chengjun Zhang et al. Genome Biology and Evolution
- Phylogenetic Analysis of 47 Chloroplast Genomes Clarifies the Contribution of Wild Species to the Domesticated Apple Maternal Line
- (2013) Svetlana V. Nikiforova et al. MOLECULAR BIOLOGY AND EVOLUTION
- MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
- (2013) Koichiro Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Phylogenetic relationships and genome divergence among the AA- genome species of the genus Oryza as revealed by 53 nuclear genes and 16 intergenic regions
- (2013) Ting Zhu et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- OrganellarGenomeDRAW—a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets
- (2013) Marc Lohse et al. NUCLEIC ACIDS RESEARCH
- Complete mitochondrial genome sequence and identification of a candidate gene responsible for cytoplasmic male sterility in radish (Raphanus sativus L.) containing DCGMS cytoplasm
- (2013) Jee Young Park et al. THEORETICAL AND APPLIED GENETICS
- Capturing chloroplast variation for molecular ecology studies: a simple next generation sequencing approach applied to a rainforest tree
- (2013) Hannah McPherson et al. BMC ECOLOGY
- Diversity and evolution of major Panax species revealed by scanning the entire chloroplast intergenic spacer sequences
- (2012) Jun Ha Kim et al. GENETIC RESOURCES AND CROP EVOLUTION
- Early evolutionary colocalization of the nuclear ribosomal 5S and 45S gene families in seed plants: evidence from the living fossil gymnosperm Ginkgo biloba
- (2012) J A Galián et al. HEREDITY
- Bayesian Phylogenetics with BEAUti and the BEAST 1.7
- (2012) Alexei J. Drummond et al. MOLECULAR BIOLOGY AND EVOLUTION
- Organellar genome, nuclear ribosomal DNA repeat unit, and microsatellites isolated from a small-scale of 454 GS FLX sequencing on two mosses
- (2012) Yang Liu et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- A map of rice genome variation reveals the origin of cultivated rice
- (2012) Xuehui Huang et al. NATURE
- Test driving genome assemblers
- (2012) Wei Fan et al. NATURE BIOTECHNOLOGY
- Navigating the tip of the genomic iceberg: Next-generation sequencing for plant systematics
- (2011) Shannon C. K. Straub et al. AMERICAN JOURNAL OF BOTANY
- Identification of disease-causing genes using microarray data mining and Gene Ontology
- (2011) Azadeh Mohammadi et al. BMC Medical Genomics
- The Oryza BAC resource: a genus-wide and genome scale tool for exploring rice genome evolution and leveraging useful genetic diversity from wild relatives
- (2011) Jetty S.S. Ammiraju et al. BREEDING SCIENCE
- Restless 5S: The re-arrangement(s) and evolution of the nuclear ribosomal DNA in land plants
- (2011) Susann Wicke et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- How to apply de Bruijn graphs to genome assembly
- (2011) Phillip E C Compeau et al. NATURE BIOTECHNOLOGY
- Genome structural variation discovery and genotyping
- (2011) Can Alkan et al. NATURE REVIEWS GENETICS
- High-Throughput Sequencing of Six Bamboo Chloroplast Genomes: Phylogenetic Implications for Temperate Woody Bamboos (Poaceae: Bambusoideae)
- (2011) Yun-Jie Zhang et al. PLoS One
- High-Throughput Sequencing of Three Lemnoideae (Duckweeds) Chloroplast Genomes from Total DNA
- (2011) Wenqin Wang et al. PLoS One
- Castor Bean Organelle Genome Sequencing and Worldwide Genetic Diversity Analysis
- (2011) Maximo Rivarola et al. PLoS One
- Chloroplast genome sequence confirms distinctness of Australian and Asian wild rice
- (2011) Daniel L. E. Waters et al. Ecology and Evolution
- Chloroplast genome sequences from total DNA for plant identification
- (2010) Catherine J. Nock et al. PLANT BIOTECHNOLOGY JOURNAL
- De novo assembly of human genomes with massively parallel short read sequencing
- (2009) R. Li et al. GENOME RESEARCH
- The evolving story of rice evolution
- (2008) Duncan A. Vaughan et al. PLANT SCIENCE
- Genome assembly forensics: finding the elusive mis-assembly
- (2008) Adam M Phillippy et al. GENOME BIOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationPublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More