Genome-Wide Comparative Functional Analyses Reveal Adaptations of Salmonella sv. Newport to a Plant Colonization Lifestyle

Of Mice and Men....and Plants: Comparative Genomics of the Dual Lifestyles of Enteric Pathogens

(2018) Max Teplitski et al.   TRENDS IN MICROBIOLOGY

Salmonella Persistence in Tomatoes Requires a Distinct Set of Metabolic Functions Identified by Transposon Insertion Sequencing

(2016) Marcos H. de Moraes et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees

(2016) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

Acquisition of Iron Is Required for Growth of Salmonella spp. in Tomato Fruit

(2015) Staci L. Nugent et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Roary: rapid large-scale prokaryote pan genome analysis

(2015) Andrew J. Page et al.   BIOINFORMATICS

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

(2015) Donovan H. Parks et al.   GENOME RESEARCH

Interactions of Salmonella with animals and plants

(2015) Agnès Wiedemann et al.   Frontiers in Microbiology

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Multistate foodborne disease outbreaks associated with raw tomatoes, United States, 1990–2010: a recurring public health problem

(2014) S. D. BENNETT et al.   EPIDEMIOLOGY AND INFECTION

Ethylene signalling affects susceptibility of tomatoes toSalmonella

(2014) Massimiliano Marvasi et al.   Microbial Biotechnology

Colonization and Internalization of Salmonella enterica in Tomato Plants

(2013) Jie Zheng et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Salmonella,a cross-kingdom pathogen infecting humans and plants

(2013) Casandra Hernández-Reyes et al.   FEMS MICROBIOLOGY LETTERS

Differential Regulation ofSalmonellaTyphimurium Genes Involved in O-Antigen Capsule Production and Their Role in Persistence Within Tomato Fruit

(2013) Massimiliano Marvasi et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Consequences of Disrupting Salmonella AI-2 Signaling on Interactions Within Soft Rots

(2013) Clayton E. Cox et al.   PHYTOPATHOLOGY

Phylogenetics and Differentiation of Salmonella Newport Lineages by Whole Genome Sequencing

(2013) Guojie Cao et al.   PLoS One

Factors That Affect Proliferation of Salmonella in Tomatoes Post-Harvest: The Roles of Seasonal Effects, Irrigation Regime, Crop and Pathogen Genotype

(2013) Massimiliano Marvasi et al.   PLoS One

Evolutionary Genomics of Salmonella enterica Subspecies

(2013) P. T. Desai et al.   mBio

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Spontaneous non-rdar mutations increase fitness of Salmonella in plants

(2012) William J. Zaragoza et al.   Environmental Microbiology Reports

The Salmonella enterica Pan-genome

(2011) Annika Jacobsen et al.   MICROBIAL ECOLOGY

Systems Biology of Tomato Fruit Development: Combined Transcript, Protein, and Metabolite Analysis of Tomato Transcription Factor ( nor, rin ) and Ethylene Receptor ( Nr ) Mutants Reveals Novel Regulatory Interactions

(2011) Sonia Osorio et al.   PLANT PHYSIOLOGY

Weighted Correlation Network Analysis (WGCNA) Applied to the Tomato Fruit Metabolome

(2011) Matthew V. DiLeo et al.   PLoS One

Evolution and Population Structure of Salmonella enterica Serovar Newport

(2010) V. Sangal et al.   JOURNAL OF BACTERIOLOGY

Specific Responses of Salmonella enterica to Tomato Varieties and Fruit Ripeness Identified by In Vivo Expression Technology

(2010) Jason T. Noel et al.   PLoS One

Human enteric pathogens in produce: un-answered ecological questions with direct implications for food safety

(2009) Max Teplitski et al.   CURRENT OPINION IN BIOTECHNOLOGY