Metabolic co-dependence drives the evolutionarily ancient Hydra–Chlorella symbiosis

Phylogenetic characterization of transporter proteins in the cnidarian-dinoflagellate symbiosis

(2018) Ashley E. Sproles et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Different Endosymbiotic Interactions in Two Hydra Species Reflect the Evolutionary History of Endosymbiosis

(2016) Masakazu Ishikawa et al.   Genome Biology and Evolution

The transcriptomic response of the coralAcropora digitiferato a competentSymbiodiniumstrain: the symbiosome as an arrested early phagosome

(2016) A. R. Mohamed et al.   MOLECULAR ECOLOGY

Study of Cnidarian-Algal Symbiosis in the “Omics” Age

(2016) Eli Meyer et al.   BIOLOGICAL BULLETIN

Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle

(2016) M. Aranda et al.   Scientific Reports

Revisiting the age, evolutionary history and species level diversity of the genus Hydra (Cnidaria: Hydrozoa)

(2015) Martin Schwentner et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The Pfam protein families database: towards a more sustainable future

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

The genome ofAiptasia, a sea anemone model for coral symbiosis

(2015) Sebastian Baumgarten et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis

(2015) S. Lin et al.   SCIENCE

Understanding nitrate assimilation and its regulation in microalgae

(2015) Emanuel Sanz-Luque et al.   Frontiers in Plant Science

Comparison of gene expression of Paramecium bursaria with and without Chlorella variabilis symbionts

(2014) Yuuki Kodama et al.   BMC GENOMICS

Oil accumulation mechanisms of the oleaginous microalga Chlorella protothecoides revealed through its genome, transcriptomes, and proteomes

(2014) Chunfang Gao et al.   BMC GENOMICS

Nitrate transport and signalling in Arabidopsis

(2014) Anne Krapp et al.   JOURNAL OF EXPERIMENTAL BOTANY

A Snapshot of a Coral “Holobiont”: A Transcriptome Assembly of the Scleractinian Coral, Porites, Captures a Wide Variety of Genes from Both the Host and Symbiotic Zooxanthellae

(2014) Chuya Shinzato et al.   PLoS One

Coral host cells acidify symbiotic algal microenvironment to promote photosynthesis

(2014) Katie L. Barott et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Lack of Parasitic Reduction in the Obligate Parasitic Green Alga Helicosporidium

(2014) Jean-François Pombert et al.   PLoS Genetics

Signalling C-Type lectin receptors, microbial recognition and immunity

(2013) J. Claire Hoving et al.   CELLULAR MICROBIOLOGY

Draft Assembly of the Symbiodinium minutum Nuclear Genome Reveals Dinoflagellate Gene Structure

(2013) Eiichi Shoguchi et al.   CURRENT BIOLOGY

Animals in a bacterial world, a new imperative for the life sciences

(2013) Margaret McFall-Ngai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Symbiosis catalyses niche expansion and diversification

(2013) J. B. Joy   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Extensive Differences in Gene Expression Between Symbiotic and Aposymbiotic Cnidarians

(2013) Erik M. Lehnert et al.   G3-Genes Genomes Genetics

Endosymbiosis

(2012) Jennifer J. Wernegreen   CURRENT BIOLOGY

Cell Biology of Cnidarian-Dinoflagellate Symbiosis

(2012) S. K. Davy et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Symbiosis between hydra and chlorella: Molecular phylogenetic analysis and experimental study provide insight into its origin and evolution

(2012) Hitomi Kawaida et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation

(2012) Guillaume Blanc et al.   GENOME BIOLOGY

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

(2012) Ruibang Luo et al.   GigaScience

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

(2011) Guillaume Marçais et al.   BIOINFORMATICS

Using the Acropora digitifera genome to understand coral responses to environmental change

(2011) Chuya Shinzato et al.   NATURE

The evolutionary origin of orphan genes

(2011) Diethard Tautz et al.   NATURE REVIEWS GENETICS

Aphid genome expression reveals host-symbiont cooperation in the production of amino acids

(2011) A. K. Hansen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Adaptations to Endosymbiosis in a Cnidarian-Dinoflagellate Association: Differential Gene Expression and Specific Gene Duplications

(2011) Philippe Ganot et al.   PLoS Genetics

Scaffolding pre-assembled contigs using SSPACE

(2010) Marten Boetzer et al.   BIOINFORMATICS

Phylogeny and biogeography of Hydra (Cnidaria: Hydridae) using mitochondrial and nuclear DNA sequences

(2010) D.E. Martínez et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

TheChlorella variabilisNC64A Genome Reveals Adaptation to Photosymbiosis, Coevolution with Viruses, and Cryptic Sex

(2010) Guillaume Blanc et al.   PLANT CELL

Genomic Analysis of Organismal Complexity in the Multicellular Green Alga Volvox carteri

(2010) S. E. Prochnik et al.   SCIENCE

Generation and analysis of transcriptomic resources for a model system on the rise: the sea anemone Aiptasia pallida and its dinoflagellate endosymbiont

(2009) Shinichi Sunagawa et al.   BMC GENOMICS

Variation in antioxidant gene expression in the scleractinian coral Acropora millepora under laboratory thermal stress

(2009) NBM Császár et al.   MARINE ECOLOGY PROGRESS SERIES

Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas

(2009) A. Z. Worden et al.   SCIENCE

More than just orphans: are taxonomically-restricted genes important in evolution?

(2009) Konstantin Khalturin et al.   TRENDS IN GENETICS

Coral Life History and Symbiosis: functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata

(2008) Jodi A Schwarz et al.   BMC GENOMICS

Microarray analysis identifies candidate genes for key roles in coral development

(2008) Lauretta C Grasso et al.   BMC GENOMICS

Uncovering the evolutionary history of innate immunity: The simple metazoan Hydra uses epithelial cells for host defence

(2008) Thomas C.G. Bosch et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Cellular mechanisms of Cnidarian bleaching: stress causes the collapse of symbiosis

(2008) V. M. Weis   JOURNAL OF EXPERIMENTAL BIOLOGY

Reactive Oxygen Species Inhibit Polycystin-2 (TRPP2) Cation Channel Activity In Term Human Syncytiotrophoblast

(2008) N MONTALBETTI et al.   PLACENTA

Metabolic interactions between algal symbionts and invertebrate hosts

(2008) DAVID YELLOWLEES et al.   PLANT CELL AND ENVIRONMENT