Comparison of gene expression of Paramecium bursaria with and without Chlorella variabilis symbionts

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Endosymbiotic associations within protists

(2010) E. C. M. Nowack et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Localization of Perialgal Vacuoles beneath the Host Cell Surface is not a Prerequisite Phenomenon for Protection from the Host's Lysosomal Fusion in the Ciliate Paramecium bursaria

(2009) Yuuki Kodama et al.   PROTIST

Symbiotic Ciliates Receive Protection Against UV Damage from their Algae: A Test with Paramecium bursaria and Chlorella

(2009) Monika Summerer et al.   PROTIST

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Micronucleus-Specific BacteriumHolospora elegansIrreversibly Enhances Stress Gene Expression of the HostParamecium caudatum

(2008) MANABU HORI et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Cycloheximide Induces Synchronous Swelling of Perialgal Vacuoles Enclosing Symbiotic Chlorella vulgaris and Digestion of the Algae in the Ciliate Paramecium bursaria

(2008) Yuuki Kodama et al.   PROTIST