Telomere repeats induce domains of H3K27 methylation in Neurospora

Targeting of Polycomb Repressive Complex 2 to RNA by Short Repeats of Consecutive Guanines

(2017) Xueyin Wang et al.   MOLECULAR CELL

Cis and trans determinants of epigenetic silencing by Polycomb repressive complex 2 in Arabidopsis

(2017) Jun Xiao et al.   NATURE GENETICS

Knock-down of the methyltransferase Kmt6 relieves H3K27me3 and results in induction of cryptic and otherwise silent secondary metabolite gene clusters in Fusarium fujikuroi

(2016) Lena Studt et al.   ENVIRONMENTAL MICROBIOLOGY

Stable Binding of the Conserved Transcription Factor Grainy Head to its Target Genes Throughout Drosophila melanogaster Development

(2016) Markus Nevil et al.   GENETICS

Neurosporachromosomes are organized by blocks of importin alpha-dependent heterochromatin that are largely independent of H3K9me3

(2016) Jonathan M. Galazka et al.   GENOME RESEARCH

Molecular dynamics of de novo telomere heterochromatin formation in budding yeast

(2016) Yi-Min Duan et al.   Journal of Genetics and Genomics

Taz1-Shelterin Promotes Facultative Heterochromatin Assembly at Chromosome-Internal Sites Containing Late Replication Origins

(2016) Martin Zofall et al.   MOLECULAR CELL

Defining chromosomal translocation risks in cancer

(2016) Marc A. Hogenbirk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Normal chromosome conformation depends on subtelomeric facultative heterochromatin inNeurospora crassa

(2016) Andrew D. Klocko et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Activation of proto-oncogenes by disruption of chromosome neighborhoods

(2016) D. Hnisz et al.   SCIENCE

Epigenetic balance of gene expression by Polycomb and COMPASS families

(2016) Andrea Piunti et al.   SCIENCE

Lack of Transcription Triggers H3K27me3 Accumulation in the Gene Body

(2016) Masaki Hosogane et al.   Cell Reports

Formation of a Polycomb-Domain in the Absence of Strong Polycomb Response Elements

(2016) Sandip De et al.   PLoS Genetics

Stable Binding of the Conserved Transcription Factor Grainy Head to its Target Genes Throughout Drosophila melanogaster Development

(2016) Markus Nevil et al.   GENETICS

Product Binding Enforces the Genomic Specificity of a Yeast Polycomb Repressive Complex

(2015) Phillip A. Dumesic et al.   CELL

The quest for mammalian Polycomb response elements: are we there yet?

(2015) Moritz Bauer et al.   CHROMOSOMA

PRC2 mediated H3K27 methylations in cellular identity and cancer

(2015) Eric Conway et al.   CURRENT OPINION IN CELL BIOLOGY

Loss of HP1 causes depletion of H3K27me3 from facultative heterochromatin and gain of H3K27me2 at constitutive heterochromatin

(2015) Kirsty Jamieson et al.   GENOME RESEARCH

Position effect modifying gene expression in a patient with ring chromosome 14

(2015) Roberta Santos Guilherme et al.   JOURNAL OF APPLIED GENETICS

Chromatin state analysis of the barley epigenome reveals a higher-order structure defined by H3K27me1 and H3K27me3 abundance

(2015) Katie Baker et al.   PLANT JOURNAL

Histone modifications rather than the novel regional centromeres of Zymoseptoria tritici distinguish core and accessory chromosomes

(2015) Klaas Schotanus et al.   Epigenetics & Chromatin

Gene Silencing Triggers Polycomb Repressive Complex 2 Recruitment to CpG Islands Genome Wide

(2014) Eva Madi Riising et al.   MOLECULAR CELL

What are memories made of? How Polycomb and Trithorax proteins mediate epigenetic memory

(2014) Philipp A. Steffen et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The CpG Island Encompassing the Promoter and First Exon of Human DNMT3L Gene Is a PcG/TrX Response Element (PRE)

(2014) Amitava Basu et al.   PLoS One

Telomere shortening and telomere position effect in mild ring 17 syndrome

(2014) Cecilia Surace et al.   Epigenetics & Chromatin

Chromatin features of plant telomeric sequences at terminal vs. internal positions

(2014) Eva Majerová et al.   Frontiers in Plant Science

LUMPY: a probabilistic framework for structural variant discovery

(2014) Ryan M Layer et al.   GENOME BIOLOGY

Coordinate Regulation of DNA Methylation and H3K27me3 in Mouse Embryonic Stem Cells

(2013) James A. Hagarman et al.   PLoS One

Regional control of histone H3 lysine 27 methylation in Neurospora

(2013) K. Jamieson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Fusarium graminearum Histone H3 K27 Methyltransferase KMT6 Regulates Development and Expression of Secondary Metabolite Gene Clusters

(2013) Lanelle R. Connolly et al.   PLoS Genetics

Redistribution of H3K27me3 upon DNA hypomethylation results in de-repression of Polycomb target genes

(2013) James P Reddington et al.   GENOME BIOLOGY

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Telomere length regulates TERRA levels through increased trimethylation of telomeric H3K9 and HP1α

(2012) Nausica Arnoult et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Analysis of the epigenetic status of telomeres by using ChIP-seq data

(2012) María I. Vaquero-Sedas et al.   NUCLEIC ACIDS RESEARCH

The Functions of Grainy Head-Like Proteins in Animals and Fungi and the Evolution of Apical Extracellular Barriers

(2012) Adam Paré et al.   PLoS One

Loss of the DNA Methyltransferase MET1 Induces H3K9 Hypermethylation at PcG Target Genes and Redistribution of H3K27 Trimethylation to Transposons in Arabidopsis thaliana

(2012) Angelique Deleris et al.   PLoS Genetics

Bulk Segregant Analysis Followed by High-Throughput Sequencing Reveals the Neurospora Cell Cycle Gene, ndc-1 , To Be Allelic with the Gene for Ornithine Decarboxylase, spe-1

(2011) Kyle R. Pomraning et al.   EUKARYOTIC CELL

SIRT6 is required for maintenance of telomere position effect in human cells

(2011) Ruth I. Tennen et al.   Nature Communications

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

A Region of the Human HOXD Cluster that Confers Polycomb-Group Responsiveness

(2010) Caroline J. Woo et al.   CELL

Involvement of transposon-like elements in penicillin gene cluster regulation

(2010) Mona Shaaban et al.   FUNGAL GENETICS AND BIOLOGY

Dnmt3a-Dependent Nonpromoter DNA Methylation Facilitates Transcription of Neurogenic Genes

(2010) H. Wu et al.   SCIENCE

A Vertebrate Polycomb Response Element Governs Segmentation of the Posterior Hindbrain

(2009) Angela Sing et al.   CELL

Telomeric repeats far from the ends: mechanisms of origin and role in evolution

(2009) A. Ruiz-Herrera et al.   CYTOGENETIC AND GENOME RESEARCH

Genome-wide mapping of alternative splicing in Arabidopsis thaliana

(2009) S. A. Filichkin et al.   GENOME RESEARCH

HIS-24 Linker Histone and SIR-2.1 Deacetylase Induce H3K27me3 in the Caenorhabditis elegans Germ Line

(2009) M. Wirth et al.   MOLECULAR AND CELLULAR BIOLOGY

Characterization of the Polycomb Group Response Elements of the Drosophila melanogaster invected Locus

(2009) M. D. Cunningham et al.   MOLECULAR AND CELLULAR BIOLOGY

Characterization of Chromosome Ends in the Filamentous Fungus Neurospora crassa

(2008) C. Wu et al.   GENETICS

Telomeric Position Effect—A Third Silencing Mechanism in Eukaryotes

(2008) J. Greg Doheny et al.   PLoS One

The fungus Neurospora crassa displays telomeric silencing mediated by multiple sirtuins and by methylation of histone H3 lysine 9

(2008) Kristina M Smith et al.   Epigenetics & Chromatin

Antagonism between DNA and H3K27 Methylation at the Imprinted Rasgrf1 Locus

(2008) Anders M. Lindroth et al.   PLoS Genetics