Strategies for high-altitude adaptation revealed from high-quality draft genome of non-violacein producing Janthinobacterium lividum ERGS5:01

High quality draft genome sequence of Janthinobacterium psychrotolerans sp. nov., isolated from a frozen freshwater pond

(2017) Xianzhe Gong et al.   Standards in Genomic Sciences

Ecology of cold environments: new insights of bacterial metabolic adaptation through an integrated genomic-phenomic approach

(2017) Stefano Mocali et al.   Scientific Reports

Cold adaptation regulated by cryptic prophage excision in Shewanella oneidensis

(2016) Zhenshun Zeng et al.   ISME Journal

First complete genome sequence of a species in the genus Microterricola, an extremophilic cold active enzyme producing bacterial strain ERGS5:02 isolated from Sikkim Himalaya

(2016) Himanshu et al.   JOURNAL OF BIOTECHNOLOGY

Complete genome sequence of Arthrobacter alpinus ERGS4:06, a yellow pigmented bacterium tolerant to cold and radiations isolated from Sikkim Himalaya

(2016) Rakshak Kumar et al.   JOURNAL OF BIOTECHNOLOGY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

The MPI bioinformatics Toolkit as an integrative platform for advanced protein sequence and structure analysis

(2016) Vikram Alva et al.   NUCLEIC ACIDS RESEARCH

Molecular Keys to the Janthinobacterium and Duganella spp. Interaction with the Plant Pathogen Fusarium graminearum

(2016) Frederike S. Haack et al.   Frontiers in Microbiology

BPGA- an ultra-fast pan-genome analysis pipeline

(2016) Narendrakumar M. Chaudhari et al.   Scientific Reports

Two-Component-System Histidine Kinases Involved in Growth of Listeria monocytogenes EGD-e at Low Temperatures

(2015) Anna Pöntinen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

ClicO FS: an interactive web-based service of Circos: Fig. 1.

(2015) Wei-Hien Cheong et al.   BIOINFORMATICS

Genomic and phenotypic insights into the ecology of Arthrobacter from Antarctic soils

(2015) Melissa Dsouza et al.   BMC GENOMICS

Complete genome sequence of Arthrobacter sp. ERGS1:01, a putative novel bacterium with prospective cold active industrial enzymes, isolated from East Rathong glacier in India

(2015) Rakshak Kumar et al.   JOURNAL OF BIOTECHNOLOGY

Multilocus sequence analysis (MLSA) in prokaryotic taxonomy

(2015) Stefanie P. Glaeser et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Draft genome sequence of Janthinobacterium lividum strain MTR reveals its mechanism of capnophilic behavior

(2015) Natalia Valdes et al.   Standards in Genomic Sciences

The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)

(2015) Marcel Huntemann et al.   Standards in Genomic Sciences

CDD: NCBI's conserved domain database

(2014) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

Type material in the NCBI Taxonomy Database

(2014) Scott Federhen   NUCLEIC ACIDS RESEARCH

Winter bloom of a rare betaproteobacterium in the Arctic Ocean

(2014) Laura Alonso-Sáez et al.   Frontiers in Microbiology

When should a DDH experiment be mandatory in microbial taxonomy?

(2013) Jan P. Meier-Kolthoff et al.   ARCHIVES OF MICROBIOLOGY

Genome sequence-based species delimitation with confidence intervals and improved distance functions

(2013) Jan P Meier-Kolthoff et al.   BMC BIOINFORMATICS

Microbial genomic taxonomy

(2013) Cristiane C Thompson et al.   BMC GENOMICS

Comparative genomics of the marine bacterial genusGlaciecolareveals the high degree of genomic diversity and genomic characteristic for cold adaptation

(2013) Qi-Long Qin et al.   ENVIRONMENTAL MICROBIOLOGY

IMG 4 version of the integrated microbial genomes comparative analysis system

(2013) Victor M. Markowitz et al.   NUCLEIC ACIDS RESEARCH

The Janthinobacterium sp. HH01 Genome Encodes a Homologue of the V. cholerae CqsA and L. pneumophila LqsA Autoinducer Synthases

(2013) Claudia Hornung et al.   PLoS One

Involvement of Two-Component System CBO0366/CBO0365 in the Cold Shock Response and Growth of Group I (Proteolytic) Clostridium botulinum ATCC 3502 at Low Temperatures

(2012) Miia Lindström et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genome Sequence of Janthinobacterium sp. Strain PAMC 25724, Isolated from Alpine Glacier Cryoconite

(2012) S. J. Kim et al.   JOURNAL OF BACTERIOLOGY

Occurrence of Horizontal Gene Transfer of PIB-type ATPase Genes among Bacteria Isolated from the Uranium Rich Deposit of Domiasiat in North East India

(2012) Macmillan Nongkhlaw et al.   PLoS One

Antarctic ice core samples: culturable bacterial diversity

(2012) Sisinthy Shivaji et al.   RESEARCH IN MICROBIOLOGY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Antimycobacterial activity in vitro of pigments isolated from Antarctic bacteria

(2010) Nazia Mojib et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Increase in Oxidative Stress at Low Temperature in an Antarctic Bacterium

(2010) M. K. Chattopadhyay et al.   CURRENT MICROBIOLOGY

Isolation of UV-B resistant bacteria from two high altitude Andean lakes (4,400 m) with saline and non saline conditions

(2010) María R. Flores et al.   JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY

IMG ER: a system for microbial genome annotation expert review and curation

(2009) Victor M. Markowitz et al.   BIOINFORMATICS

Shifting the genomic gold standard for the prokaryotic species definition

(2009) Michael Richter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The minimum information about a genome sequence (MIGS) specification

(2008) Dawn Field et al.   NATURE BIOTECHNOLOGY