Genomic and phenotypic insights into the ecology of Arthrobacter from Antarctic soils

Comparative proteomic analysis of Arthrobacter phenanthrenivorans Sphe3 on phenanthrene, phthalate and glucose

(2015) Elpiniki Vandera et al.   Journal of Proteomics

Some like it cold: understanding the survival strategies of psychrophiles

(2014) P. De Maayer et al.   EMBO REPORTS

Paenibacillus darwinianus sp. nov., isolated from gamma-irradiated Antarctic soil

(2014) M. Dsouza et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Genome-Based Comparative Analyses of Antarctic and Temperate Species of Paenibacillus

(2014) Melissa Dsouza et al.   PLoS One

Comparative genomics of the marine bacterial genusGlaciecolareveals the high degree of genomic diversity and genomic characteristic for cold adaptation

(2013) Qi-Long Qin et al.   ENVIRONMENTAL MICROBIOLOGY

Transcriptional profiling of Gram-positiveArthrobacterin the phyllosphere: induction of pollutant degradation genes by natural plant phenolic compounds

(2013) Tanja R. Scheublin et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial composition of soils of the Lake Wellman area, Darwin Mountains, Antarctica

(2013) Jackie M. Aislabie et al.   EXTREMOPHILES

Bacterial growth at −15 °C; molecular insights from the permafrost bacterium Planococcus halocryophilus Or1

(2013) Nadia C S Mykytczuk et al.   ISME Journal

Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

(2013) Mads Albertsen et al.   NATURE BIOTECHNOLOGY

Poles Apart: Arctic and Antarctic Octadecabacter strains Share High Genome Plasticity and a New Type of Xanthorhodopsin

(2013) John Vollmers et al.   PLoS One

Factors Controlling Soil Microbial Biomass and Bacterial Diversity and Community Composition in a Cold Desert Ecosystem: Role of Geographic Scale

(2013) David J. Van Horn et al.   PLoS One

CMG-Biotools, a Free Workbench for Basic Comparative Microbial Genomics

(2013) Tammi Vesth et al.   PLoS One

Complete genome sequence of Arthrobacter sp. strain FB24

(2013) Cindy H. Nakatsu et al.   Standards in Genomic Sciences

Carotenoid biosynthesis and overproduction in Corynebacterium glutamicum

(2012) Sabine A E Heider et al.   BMC MICROBIOLOGY

Genome Sequence of Exiguobacterium antarcticum B7, Isolated from a Biofilm in Ginger Lake, King George Island, Antarctica

(2012) Adriana Ribeiro Carneiro et al.   JOURNAL OF BACTERIOLOGY

A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs

(2012) Martin T Swain et al.   Nature Protocols

Rapid microbial response to the presence of an ancient relic in the Antarctic Dry Valleys

(2012) Grace Tiao et al.   Nature Communications

Regulation of expression of trehalose-6-phosphate synthase during cold shock in Arthrobacter strain A3

(2011) Xi-Ming Chen et al.   EXTREMOPHILES

The Inter-Valley Soil Comparative Survey: the ecology of Dry Valley edaphic microbial communities

(2011) Charles K Lee et al.   ISME Journal

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

(2011) I. Pagani et al.   NUCLEIC ACIDS RESEARCH

IMG: the integrated microbial genomes database and comparative analysis system

(2011) V. M. Markowitz et al.   NUCLEIC ACIDS RESEARCH

PHAST: A Fast Phage Search Tool

(2011) Y. Zhou et al.   NUCLEIC ACIDS RESEARCH

Complete genome sequence of Cellulophaga algicola type strain (IC166T)

(2011) Birte Abt et al.   Standards in Genomic Sciences

The Genome Sequence of Psychrobacter arcticus 273-4, a Psychroactive Siberian Permafrost Bacterium, Reveals Mechanisms for Adaptation to Low-Temperature Growth

(2010) H. L. Ayala-del-Rio et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Scaffolding pre-assembled contigs using SSPACE

(2010) Marten Boetzer et al.   BIOINFORMATICS

Prodigal: prokaryotic gene recognition and translation initiation site identification

(2010) Doug Hyatt et al.   BMC BIOINFORMATICS

Temporal and spatial variation in active layer depth in the McMurdo Sound Region, Antarctica

(2009) Leah S. Adlam et al.   ANTARCTIC SCIENCE

Genomics of an extreme psychrophile, Psychromonas ingrahamii

(2009) Monica Riley et al.   BMC GENOMICS

Isotopic evidence for the provenance and turnover of organic carbon by soil microorganisms in the Antarctic dry valleys

(2009) D. W. Hopkins et al.   ENVIRONMENTAL MICROBIOLOGY

Crenarchaeotaaffiliated with group 1.1b are prevalent in coastal mineral soils of the Ross Sea region of Antarctica

(2009) J. Ayton et al.   ENVIRONMENTAL MICROBIOLOGY

Arthrobacter phenanthrenivorans sp. nov., to accommodate the phenanthrene-degrading bacterium Arthrobacter sp. strain Sphe3

(2009) A. Kallimanis et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

The genome sequence of the psychrophilic archaeon, Methanococcoides burtonii: the role of genome evolution in cold adaptation

(2009) Michelle A Allen et al.   ISME Journal

Impact of Phenolic Substrate and Growth Temperature on theArthrobacter chlorophenolicusProteome

(2009) Maria Unell et al.   JOURNAL OF PROTEOME RESEARCH

Highly specialized microbial diversity in hyper-arid polar desert

(2009) S. B. Pointing et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Architecture of thermal adaptation in an Exiguobacterium sibiricum strain isolated from 3 million year old permafrost: A genome and transcriptome approach

(2008) Debora F Rodrigues et al.   BMC GENOMICS

Microbial community composition in soils of Northern Victoria Land, Antarctica

(2008) Thomas D. Niederberger et al.   ENVIRONMENTAL MICROBIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH

Relation between soil classification and bacterial diversity in soils of the Ross Sea region, Antarctica

(2007) J.M. Aislabie et al.   GEODERMA

Antarctic soils and soil formation in a changing environment: A review

(2007) F.C. Ugolini et al.   GEODERMA