Sensitive detection of mitochondrial DNA variants for analysis of mitochondrial DNA-enriched extracts from frozen tumor tissue

Complete sequence-based pathway analysis by differential on-chip DNA and RNA extraction from a single cell

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The ability of human nuclear DNA to cause false positive low-abundance heteroplasmy calls varies across the mitochondrial genome

(2016) Levent Albayrak et al.   BMC GENOMICS

Ultrasensitive Detection of Multiplexed Somatic Mutations Using MALDI-TOF Mass Spectrometry

(2016) Michael J. Mosko et al.   JOURNAL OF MOLECULAR DIAGNOSTICS

Mitochondrial DNA content in breast cancer: Impact on in vitro and in vivo phenotype and patient prognosis

(2016) Marjolein J.A. Weerts et al.   Oncotarget

Fast mitochondrial DNA isolation from mammalian cells for next-generation sequencing

(2016) Wilber Quispe-Tintaya et al.   BIOTECHNIQUES

Frequent somatic transfer of mitochondrial DNA into the nuclear genome of human cancer cells

(2015) Young Seok Ju et al.   GENOME RESEARCH

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

PCR-Free Enrichment of Mitochondrial DNA from Human Blood and Cell Lines for High Quality Next-Generation DNA Sequencing

(2015) Meetha P. Gould et al.   PLoS One

Extensive tissue-related and allele-related mtDNA heteroplasmy suggests positive selection for somatic mutations

(2015) Mingkun Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Simultaneous DNA and RNA Mapping of Somatic Mitochondrial Mutations across Diverse Human Cancers

(2015) James B. Stewart et al.   PLoS Genetics

TSSV: a tool for characterization of complex allelic variants in pure and mixed genomes

(2014) Seyed Yahya Anvar et al.   BIOINFORMATICS

Mutational signatures: the patterns of somatic mutations hidden in cancer genomes

(2014) Ludmil B Alexandrov et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Mechanisms underlying mutational signatures in human cancers

(2014) Thomas Helleday et al.   NATURE REVIEWS GENETICS

The genomic landscape of polymorphic human nuclear mitochondrial insertions

(2014) Gargi Dayama et al.   NUCLEIC ACIDS RESEARCH

Origins and functional consequences of somatic mitochondrial DNA mutations in human cancer

(2014) Young Seok Ju et al.   eLife

Comprehensive next-generation sequence analyses of the entire mitochondrial genome reveal new insights into the molecular diagnosis of mitochondrial DNA disorders

(2013) Hong Cui et al.   GENETICS IN MEDICINE

Recurrent Tissue-Specific mtDNA Mutations Are Common in Humans

(2013) David C. Samuels et al.   PLoS Genetics

Comprehensive One-Step Molecular Analyses of Mitochondrial Genome by Massively Parallel Sequencing

(2012) W. Zhang et al.   CLINICAL CHEMISTRY

Human mitochondrial DNA: roles of inherited and somatic mutations

(2012) Eric A. Schon et al.   NATURE REVIEWS GENETICS

Spectrum of somatic mitochondrial mutations in five cancers

(2012) T. C. Larman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Validated primer set that prevents nuclear DNA sequences of mitochondrial origin co-amplification: A revision based on the New Human Genome Reference Sequence (GRCh37)

(2011) Amanda Ramos et al.   ELECTROPHORESIS

Nuclear insertions of mitochondrial origin: Database updating and usefulness in cancer studies

(2011) Amanda Ramos et al.   MITOCHONDRION

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Mitochondrial DNA Mutations Regulate Metastasis of Human Breast Cancer Cells

(2011) Hirotake Imanishi et al.   PLoS One

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

Mitochondrial DNA sequences are present inside nuclear DNA in rat tissues and increase with age

(2010) Pilar Caro et al.   MITOCHONDRION

Heteroplasmic mitochondrial DNA mutations in normal and tumour cells

(2010) Yiping He et al.   NATURE

Molecular Poltergeists: Mitochondrial DNA Copies (numts) in Sequenced Nuclear Genomes

(2010) Einat Hazkani-Covo et al.   PLoS Genetics

Human mitochondrial DNA complete amplification and sequencing: A new validated primer set that prevents nuclear DNA sequences of mitochondrial origin co-amplification

(2009) Amanda Ramos et al.   ELECTROPHORESIS

DNA extraction procedures meaningfully influence qPCR-based mtDNA copy number determination

(2009) Wen Guo et al.   MITOCHONDRION

Quantification of mitochondrial DNA copy number: Pre-analytical factors

(2009) Antonio L. Andreu et al.   MITOCHONDRION

Real-Time DNA Sequencing from Single Polymerase Molecules

(2008) J. Eid et al.   SCIENCE